DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF2gamma and 42sp50

DIOPT Version :10

Sequence 1:NP_731993.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001011438.1 Gene:42sp50 / 496924 XenbaseID:XB-GENE-5853280 Length:463 Species:Xenopus tropicalis


Alignment Length:504 Identity:107/504 - (21%)
Similarity:164/504 - (32%) Gaps:181/504 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LTPLSPEVISRQATINIGTIGHVAHGKSTVV------------KAISGVQTV------------- 66
            :|..:|:    :..:|:..||||..||||..            :|:..|:..             
 Frog     1 MTDKTPQ----KTHLNVVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKGSFKFAW 61

  Fly    67 ---RFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRH 128
               :.|.|.||.|||.:     .::|                                 |:..|.
 Frog    62 ILDKLKAERERGITIDI-----SLWK---------------------------------FQTNRF 88

  Fly   129 -VSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKLKQILI 186
             ::.:|.|||...:..|:.|.:..|.|||:::....      ....||.||......|.:||:::
 Frog    89 TITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQMIV 153

  Fly   187 LQNKIDLIKESQAKEQYEEITKFVQ------GTVAEGAPIIPISAQLKYNI-------------- 231
            ..||:||.....:.::::|:.:.|.      |......|.:|:|.....||              
 Frog   154 CVNKMDLTDPPYSHKRFDEVVRNVTVYLKKIGYNPTTIPFVPVSGWTGENISSPSQKMGWFKGWK 218

  Fly   232 ----------DVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGV 286
                      ..|.|.:...:| |.|..|.|.||.:   .||.|.|.     .|.|..|.|.:|:
 Frog   219 VKRKDGFTKGQSLLEVLDALVP-PVRPANKPLRLPL---QDVYKIGG-----IGTVPVGKIETGI 274

  Fly   287 LKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPG-----------------G 334
            ||.|..|...|.             ...:.:.|:......||.|.||                 |
 Frog   275 LKPGMTITFAPS-------------GFAAEVKSIEMHHEPLQTAFPGFNVGFNVKNIAVKSLKRG 326

  Fly   335 LIGVGTKIDPTLCRADRLVGQVL-----GAV--GQLPDI---YQELEISYYLLRRLLGVRTDGDK 389
            .:...:|.||. ..|.....||:     |.:  |..|.|   ...:...:..|:..:..||.   
 Frog   327 NVAGNSKSDPP-TEASSFTAQVIILNHPGLIKAGYSPVIDCHTAHITCQFTELQEKIDRRTG--- 387

  Fly   390 KGARVEKLQKNEILLVNIGSLSTGGRISATKGDLAKIVL--TTPVCTEK 436
                 :||:.|..:|              ..||.|.|.|  ..|.|.|:
 Frog   388 -----KKLEDNPGVL--------------KSGDAAIITLKPIKPFCVER 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_731993.1 PTZ00327 11..465 CDD:240362 107/504 (21%)
42sp50NP_001011438.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..447 CDD:476819 105/498 (21%)

Return to query results.
Submit another query.