DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and gspt1

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001003992.1 Gene:gspt1 / 445485 ZFINID:ZDB-GENE-040822-36 Length:564 Species:Danio rerio


Alignment Length:488 Identity:99/488 - (20%)
Similarity:184/488 - (37%) Gaps:150/488 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTV---VKAISGVQTV 66
            |||    ..:.::| ..:...||.|..|:. .::..:|:..||||..||||:   :..::|:...
Zfish   110 EAQ----DEMMEED-EEMPTPKLPPPPPDA-PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEK 168

  Fly    67 RFKNELERNI-------------------------TIKLGYANAKIYKCDNPKCPRPASFVSDAS 106
            |...:.||..                         |:::|.|..:..|                 
Zfish   169 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEK----------------- 216

  Fly   107 SKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP---- 167
                                :|.:.:|.|||...:..|:.||:..|.|:|:|:..:...:.    
Zfish   217 --------------------KHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEK 261

  Fly   168 --QTSEHLAAIEIMKLKQILILQNKID-------LIKESQAKEQYEEITKFVQGTVAEGAPIIPI 223
              ||.||....:...:|.:::|.||:|       |.:..:.||:.....|.|.....:....:|.
Zfish   262 GGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIHFMPC 326

  Fly   224 S----AQLKYNIDVLCEYI--------VNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGG 276
            |    |.||.:.| ||.:.        ::.:|:..|..:.|.||.::..:         .|: |.
Zfish   327 SGLTGANLKESSD-LCPWYTGLPFIPHLDSLPIFSRSSDGPLRLPIVDKY---------KDM-GT 380

  Fly   277 VAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTK 341
            |..|.:.||.:...|::.:.|...|.:             ::||.::..|.:||.||..:.:..|
Zfish   381 VVLGKLESGSIAKAQQLIMMPNRHTVE-------------VLSLLSDDVETEYAGPGENLKLRLK 432

  Fly   342 ------IDP--TLCRADRLV-------GQVL------------GAVGQLPDIYQELEISYYLLRR 379
                  |.|  .||.|:.|.       .|::            .||..:....:|::||..:.  
Zfish   433 GIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALIC-- 495

  Fly   380 LLGVRTDGDKKGARVEKLQKNEILLVNIGSLST 412
            |:..:| |:|...|...::::::.:..:.:..|
Zfish   496 LVDKKT-GEKSKTRPRFVKQDQVCIARLRAAGT 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 96/482 (20%)
gspt1NP_001003992.1 PAM2 <32..44 CDD:284542
TEF1 138..561 CDD:227581 91/454 (20%)
EF1_alpha 141..358 CDD:206670 51/254 (20%)
eRF3_II 366..447 CDD:293906 23/103 (22%)
eRF3_C_III 453..559 CDD:294003 12/78 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592517
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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