DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and mEFTu1

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001163144.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster


Alignment Length:461 Identity:115/461 - (24%)
Similarity:183/461 - (39%) Gaps:105/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NIGTIGHVAHGKSTVVKAISGV----QTVRFK--NELE-------RNITIKLGYANAKIYKCDNP 93
            |:||||||.|||:|:..||:.|    |....|  ||::       |.|||.:.:..   |:.:  
  Fly    84 NVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITINVAHVE---YQTE-- 143

  Fly    94 KCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLI 158
                                            .||....|||||...:..|:.|.|.||.|:|::
  Fly   144 --------------------------------TRHYGHTDCPGHADYIKNMITGTAQMDGAILVV 176

  Fly   159 AGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITKFV--QGTVAEGAPII 221
            |..:.. .|||.||:...:.:.:..|::..||:|...|........||.:.:  .|...:..|::
  Fly   177 AATDGA-MPQTREHMLLAKQIGIDHIVVFINKVDAADEEMVDLVEMEIRELLTEMGYDGDKIPVV 240

  Fly   222 PISAQL----------KYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGG 276
            ..||..          |..|..|.:.:.:.||.|.|:.:.|..|.|...:.:  ||      :|.
  Fly   241 KGSALCALEDKSPEIGKEAILKLLQEVDSFIPTPVRELDKPFLLPVENVYSI--PG------RGT 297

  Fly   277 VAGGSILSGVLKVGQEIE-VRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGV-- 338
            |..|.:..||:|.|.|.| |....|.|.:   :|...:|.:|         |:.|..|..:|.  
  Fly   298 VVTGRLERGVVKKGMECEFVGYNKVLKST---VTGVEMFHQI---------LEEAQAGDQLGALV 350

  Fly   339 -GTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNEI 402
             |.|      |.|...|.|:...|.:..: .:||...|:|.:..|.||.......:::...:...
  Fly   351 RGVK------RDDIKRGMVMCKPGSVKAL-DQLEAQVYILSKDEGGRTKPFMSFIQLQMFSRTWD 408

  Fly   403 LLVNIGSLSTGGRISATKGDLAKIV--LTTPVCTEKGEKIALSRRVENHWRLIGWGQIFGGKTIT 465
            ..|.:   ....:.....|:..|::  |..|:..|:|::..|  |..|  ..:|.|.:  ..|:.
  Fly   409 CAVQV---QIPDKEMVMPGEDTKLILRLIRPMVLEQGQRFTL--RDGN--LTLGTGVV--TSTLP 464

  Fly   466 PVLDSQ 471
            |:.:||
  Fly   465 PLTESQ 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 112/453 (25%)
mEFTu1NP_001163144.1 PRK00049 73..463 CDD:234596 111/452 (25%)
EF_Tu 81..274 CDD:206671 59/227 (26%)
EFTU_II 282..368 CDD:293898 29/111 (26%)
mtEFTU_III 371..462 CDD:294005 19/100 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464541
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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