DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and eIF5B

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster


Alignment Length:472 Identity:103/472 - (21%)
Similarity:167/472 - (35%) Gaps:148/472 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSNLDVSKLTPLSPEVISRQATIN------------IGTIGHVAHGKSTVVKAISGVQTVRFKNE 71
            |:|...|:.......::.|||...            :..:|||..||:   |.:..::....::.
  Fly   522 LANDPESRRLRAEARILKRQAEAEKKRSTDELRAGVVCVLGHVDTGKT---KILDKLRRTHVQDS 583

  Fly    72 LERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPG 136
            ....||.::|..|..|     ........:|..|:..:..||              .:..:|.||
  Fly   584 EAGGITQQIGATNVPI-----EAIKEQTKYVKAAAGFEHRLP--------------GLLIIDTPG 629

  Fly   137 HDILMATMLNGAAVMDAALLLI---AGNESCPQPQTSEHLAAIEIMKLKQ--ILILQNKI----- 191
            |:........|:::.|.|:|::   .|.|    |||.|   :|:::|.|:  .::..|||     
  Fly   630 HESFSNLRNRGSSLCDIAILVVDIMHGLE----PQTIE---SIQLLKKKKCPFIVALNKIDRLYD 687

  Fly   192 ----------DLIKESQAKEQ--YEEITKFVQGTVAEGA----------------PIIPISA--- 225
                      |::||.|:..|  :::.||.|....||..                .::|.||   
  Fly   688 WKQLARRDVRDVLKEQQSNTQLEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISG 752

  Fly   226 ----QLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKG-GVAGGSIL-S 284
                .|.:.|...|:.::.|            ||:.  |.::.....||..|.| |....:|| :
  Fly   753 EGMGNLLFMIADFCQNMLAK------------RLMY--SEELQATVLEVKALPGLGTTIDAILIN 803

  Fly   285 GVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLI-------GVGTKI 342
            |.|:.||.      :|...:||     ||.::|.||...|...:..|....:       ..|.||
  Fly   804 GKLREGQT------MVVAGTDG-----PIVTQIRSLLMPQPMKELRVKNAYVEYKEVKAAQGVKI 857

  Fly   343 DPTLCRADRLVGQVLG---AVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNEILL 404
                 .|..|...:.|   .:...||   |:||.              .::.||..|...:.|.|
  Fly   858 -----AAKDLEKAIAGINLLIAHKPD---EVEIC--------------TEEVARELKSALSHIKL 900

  Fly   405 VNIG---SLSTGGRISA 418
            ...|   ..||.|.:.|
  Fly   901 AQTGVHVQASTLGSLEA 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 103/472 (22%)
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 97/441 (22%)
IF2_eIF5B 557..769 CDD:206674 51/240 (21%)
aeIF5B_II 779..889 CDD:293904 32/142 (23%)
IF-2 890..993 CDD:288813 8/28 (29%)
IF2_aeIF5B_IV 1016..1110 CDD:293911
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464581
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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