DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and mIF2

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster


Alignment Length:484 Identity:99/484 - (20%)
Similarity:177/484 - (36%) Gaps:143/484 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQT 65
            :||.|.   .|.:.||:    .||:...|.:||::..:..: :..:|||.|||:|::.::.|...
  Fly   131 VATPEE---TNADEQKE----RDVAPRPPAAPELLQPRPPV-VTVMGHVDHGKTTLLDSLRGADV 187

  Fly    66 VRFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVS 130
            ...:   ...||..:|                  :|.....:.:                  .|:
  Fly   188 AAGE---AGGITQHIG------------------AFTVTLENGE------------------RVT 213

  Fly   131 FVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKQ--ILILQNKIDL 193
            |:|.|||....|....||...|..:|::|..:.. ..||.|   .|::.|..|  |::..||||.
  Fly   214 FLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGV-MAQTRE---VIQLAKEAQVPIIVALNKIDK 274

  Fly   194 IKESQAKEQYEEITKFVQGTVAEG--APIIPISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPR-- 254
             .|:..::...|:.:........|  ..:|||||....|:::|.|.:..:..:  ....|.|.  
  Fly   275 -PEANIEKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATL--MGLKADPTGL 336

  Fly   255 ---LIVIRSFDVNKPGCEVADLKGGV--AGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIF 314
               ::|....|..:.....|.:..|.  .|..:|||:                          ..
  Fly   337 VEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGL--------------------------AH 375

  Fly   315 SRIVSLFAEQNE-LQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLR 378
            :::..||....: |..|.||..:                  ::||        ::||.::..|  
  Fly   376 AKVRGLFDHNGQPLSEAPPGTPV------------------EILG--------WRELPLAGDL-- 412

  Fly   379 RLLGVRTDGDKKGARVEKLQKNEILLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALS 443
             :|.|.|  :||...|.|.:::|         |...:|.::..::.|          |.|:....
  Fly   413 -ILEVET--EKKAHAVLKYREHE---------SQQEKIESSSDEIRK----------KEEEHQAK 455

  Fly   444 RRVENH-WRLIGWGQIFGGKTITPVLDSQ 471
            .|.|.. .||.|..::.||:.:..|.:::
  Fly   456 YRAEREARRLAGRFRMRGGQRVKQVDENE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 95/466 (20%)
mIF2NP_651621.2 InfB 158..689 CDD:223606 88/450 (20%)
IF2_eIF5B 163..327 CDD:206674 46/210 (22%)
IF2_mtIF2_II 336..431 CDD:293903 26/151 (17%)
IF-2 482..575 CDD:288813 0/3 (0%)
mtIF2_IVc 593..680 CDD:293893
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464585
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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