DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and si:dkey-37o8.1

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001157466.1 Gene:si:dkey-37o8.1 / 407641 ZFINID:ZDB-GENE-030131-5667 Length:458 Species:Danio rerio


Alignment Length:460 Identity:109/460 - (23%)
Similarity:178/460 - (38%) Gaps:119/460 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 INIGTIGHVAHGKST----VVKAISGVQTVRFKNELERNITIKLGYANAK-IYKCDNPKCPRPAS 100
            ||:..||||..||||    :|....|:.. |...:.|:..| ::|.::.| .:..|..|..|...
Zfish     8 INLVIIGHVDGGKSTTTGHLVYKCGGIDH-RTIEKYEKAAT-QMGKSSFKYAWVLDKLKAERERG 70

  Fly   101 FVSDASSKDDSLPCTRLNCSGNFRLVRHV-SFVDCPGHDILMATMLNGAAVMDAALLLIAGNES- 163
            ...|.|..             .|...::. :.:|.|||...:..|:.|.:..|||||:::..:. 
Zfish    71 ITIDISLL-------------KFNTQKYTFTIIDAPGHRDFIKNMITGTSQADAALLIVSAAKGE 122

  Fly   164 -----CPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITK----FVQ--GTVAEG 217
                 ....||.||......:.:||:::..||:||.:...::::|:|:.:    ||:  |.....
Zfish   123 FEAGISRNGQTREHALLAYTLGVKQLVVCVNKMDLTEPPFSQKRYDEVVRNVSVFVKKIGFEIGA 187

  Fly   218 APIIPISAQLKYNIDV------------------------LCEYIVNKIPVPPRDFNAPPRLIVI 258
            .|.||||.....|:.|                        |.| :::.:..|.|:...|.||.: 
Zfish   188 VPFIPISGWSGENMIVPSQKMQWFKGWKLKRKEGHCHGRTLLE-VLDSLHPPVRNAGKPLRLPL- 250

  Fly   259 RSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAE 323
              .||.|.|.     .|.|..|.|.:||||        ||:|...|...:|     :.:.|:...
Zfish   251 --QDVYKIGG-----VGTVPVGKIETGVLK--------PGMVLTFSPAKLT-----AEVKSIEMH 295

  Fly   324 QNELQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGAVGQLP--DIYQ------------ELEISY 374
            ...||.|:||..:|...| :.::....|  |.|.|...|.|  |:..            ::::.|
Zfish   296 HQGLQTALPGHNVGFNIK-NVSVKNLRR--GDVAGNAQQDPPSDVSSFIAQIIMLNHPGKIKVGY 357

  Fly   375 ---------YLLRRLLGVRTDGDKKGARVEKLQKNEILLVNIGSLSTGGRISATKGDLAKIVLTT 430
                     ::..|...:|...|::..|  ||:            |....:.:..|...|:|...
Zfish   358 SPVLDCHTTHVSCRFAELREKLDRRSGR--KLE------------SWPQYLRSGDGATVKLVPNK 408

  Fly   431 PVCTE 435
            |:|.|
Zfish   409 PLCVE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 109/460 (24%)
si:dkey-37o8.1NP_001157466.1 PTZ00141 1..458 CDD:185474 109/460 (24%)
EF1_alpha 9..239 CDD:206670 57/245 (23%)
EF1_alpha_II 244..332 CDD:293894 32/111 (29%)
EF1_alpha_III 337..438 CDD:294004 14/91 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592501
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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