DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and eEF2

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster


Alignment Length:492 Identity:108/492 - (21%)
Similarity:167/492 - (33%) Gaps:171/492 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NIGTIGHVAHGKST-----VVKA--ISGVQT--VRF----KNELERNITIKLGYANAKIYKCDNP 93
            |:..|.||.|||||     |.||  |:|.:.  .||    |:|.||.|||| ..|.:..::.:. 
  Fly    21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIK-STAISMYFEVEE- 83

  Fly    94 KCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLI 158
               :...|::....::.       .|.|..     ::.:|.|||....:.:.....|.|.||:::
  Fly    84 ---KDLVFITHPDQREK-------ECKGFL-----INLIDSPGHVDFSSEVTAALRVTDGALVVV 133

  Fly   159 -AGNESCPQPQTSEHLAAIEIMKLKQILILQNKID---LIKESQAKEQYEEITKFVQGTVAEGAP 219
             ..:..|.|.:|....|..|  ::|.||.: ||:|   |..:..|:|.|:...:.|:.       
  Fly   134 DCVSGVCVQTETVLRQAIAE--RIKPILFM-NKMDRALLELQLDAEELYQTFQRIVEN------- 188

  Fly   220 IIPISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILS 284
                               ||.|.....|...|...:            .|...||.|..||.|.
  Fly   189 -------------------VNVIIATYNDDGGPMGEV------------RVDPSKGSVGFGSGLH 222

  Fly   285 G---VLKVGQEI---EVRPGVV---------------------TKDSDGNIT-CRPIFSRIVSLF 321
            |   .||...|:   :.:..||                     .|::|...: |..|...|..:|
  Fly   223 GWAFTLKQFSEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRSFCMYILDPIYKVF 287

  Fly   322 AEQNELQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLRRLLGV--- 383
                                        |.::.            |::.||...|.:  :||   
  Fly   288 ----------------------------DAIMN------------YKKEEIGTLLEK--IGVTLK 310

  Fly   384 RTDGDKKGARVEK------LQKNEILLVNIGSLSTGGRISATK-----------GDLAKIVLTTP 431
            ..|.||.|..:.|      |...|.||..| ::.....:.|.|           .|.|.|.:.: 
  Fly   311 HEDKDKDGKALLKTVMRTWLPAGEALLQMI-AIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKS- 373

  Fly   432 VCTEKGE-KIALSRRV--ENHWRLIGWGQIFGGKTIT 465
             |...|. .:.:|:.|  .:..|...:|::|.||..|
  Fly   374 -CDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVAT 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 107/490 (22%)
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 108/492 (22%)
EF2 20..236 CDD:206672 68/272 (25%)
EF2_snRNP_like_II 380..474 CDD:293901 8/30 (27%)
EF2_snRNP_III 489..560 CDD:293918
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464583
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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