DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and eRF3

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster


Alignment Length:487 Identity:94/487 - (19%)
Similarity:175/487 - (35%) Gaps:137/487 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRNLQKQDLSNLDVSKLTPLSPEV-------------------------ISRQATINIGTIGHVA 50
            |......|..::|.:.:||...||                         .|::..:|:..||||.
  Fly   141 NNETDPADSWDVDDAVITPEDEEVEDAEFTEGEATPKVSKKKVVKVEENRSKREHVNVVFIGHVD 205

  Fly    51 HGKSTV---VKAISGVQTVRFKNELERNITIK------LGYA-NAKIYKCDNPKCPR--PASFVS 103
            .||||:   :.:::|:...|...:.||....|      |.:| :....:.|..|...  .|.|.:
  Fly   206 AGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGKTVEVGRAFFET 270

  Fly   104 DASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP- 167
            |.                     :|.:.:|.|||...:..|:.|||..|.|:|:|:..:...:. 
  Fly   271 DR---------------------KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETG 314

  Fly   168 -----QTSEHLAAIEIMKLKQILILQNKI-------DLIKESQAKEQYEEITKFVQGTVAEGAPI 220
                 ||.||....:...:|.:::|.||:       |..:.::.|::.....|.:....|:....
  Fly   315 FDRGGQTREHAMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTF 379

  Fly   221 IPISAQLKYNI-----DVLCEY--------IVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVAD 272
            :|.|....|.:     :.||.:        .::::|...|..:.|..:.::..:         .|
  Fly   380 MPCSGLSGYGLKDQIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVDKY---------KD 435

  Fly   273 LKGGVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIG 337
            : |.|..|.:.||..:.||.:.|.|.......|             .||::..|:....||..:.
  Fly   436 M-GTVVMGKVESGTARKGQNLLVMPNRTQVAVD-------------QLFSDDFEVTSVGPGENVK 486

  Fly   338 VGTK------IDP--TLCRADRLV-------GQVL------------GAVGQLPDIYQELEISYY 375
            :..|      :.|  .||.|...:       .||:            .||..:....:|:.:...
  Fly   487 IKLKGIEEEDVSPGFVLCDAANPIKTGKIFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKAL 551

  Fly   376 LLRRLLGVRTDGDKKGARVEKLQKNEILLVNI 407
            :   .|..:..|||...|...::::::.::.|
  Fly   552 I---CLVDKKSGDKSKTRPRFVKQDQVAIMRI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 94/487 (19%)
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 87/437 (20%)
EF1_alpha 197..416 CDD:206670 51/239 (21%)
eRF3_II 424..505 CDD:293906 20/103 (19%)
eRF3_C_III 511..617 CDD:294003 11/73 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464587
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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