DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and mEFG1

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster


Alignment Length:435 Identity:87/435 - (20%)
Similarity:146/435 - (33%) Gaps:144/435 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NIGTIGHVAHGKSTVVK-------AISGVQTVRFKN-----------ELERNITIKLGYANAKIY 88
            |||...|:..||:|:.:       .|:.:..||.|:           |.:|.|||: ..|...::
  Fly    44 NIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQ-SAATYTLW 107

  Fly    89 KCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDA 153
            |..|                                    ::.:|.|||......:.....|:|.
  Fly   108 KDTN------------------------------------INIIDTPGHVDFTVEVERALRVLDG 136

  Fly   154 ALLLIAGNESCP----QPQTSEHLAAIEIMKLKQI--LILQNKIDLIKE------SQAKEQYEEI 206
            |:|::     |.    |.||   |.....||...:  |...||:|.:..      ||.:.:....
  Fly   137 AVLVL-----CAVGGVQSQT---LTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHN 193

  Fly   207 TKFVQGTVAEGAPIIPISAQ--LKYNIDVLCEYIV------------NKIPVPPRDFNAPPRLIV 257
            ..|:|         :||..:  .|..:|::.|..:            ::||...|..:...|..:
  Fly   194 AAFIQ---------LPIGVESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQEL 249

  Fly   258 IRS-----------FDVNKPGCEVADLKGGVAGGSI---LSGVLKVGQEIEVRPGVVTKDSDGNI 308
            |..           |...||..| .|:|..:....|   .:.|| ||..::            |.
  Fly   250 IEHLSNADETLGELFLEEKPFTE-DDIKAALRRTCINRTFTPVL-VGTALK------------NK 300

  Fly   309 TCRPIFSRIVSLFAEQNELQ---YAVPGGLIGVGTKIDPTLCRADRLVGQVL----GAVGQLPDI 366
            ..:|:...::.......|::   :....|.......::|.....|..||...    |..|||..:
  Fly   301 GVQPLLDAVLDYLPNPGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYL 365

  Fly   367 --YQELEISYYLLRR---LLGVRTDGDKKGARVEKLQKNEILLVN 406
              ||.      :||:   :...||:...:.||:.:|..|::..||
  Fly   366 RCYQG------VLRKGDNIFNARTNKKVRIARLVRLHSNQMEDVN 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 87/435 (20%)
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 65/339 (19%)
PRK12740 48..727 CDD:237186 84/431 (19%)
mtEFG1_II_like 347..427 CDD:293908 18/64 (28%)
EFG_III 441..516 CDD:293919
EFG_mtEFG1_IV 519..636 CDD:238715
mtEFG1_C 641..718 CDD:239764
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464582
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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