DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and gspt1l

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_942101.1 Gene:gspt1l / 325284 ZFINID:ZDB-GENE-030131-4009 Length:577 Species:Danio rerio


Alignment Length:499 Identity:102/499 - (20%)
Similarity:185/499 - (37%) Gaps:149/499 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KLTPLSPEVISRQATINIGTIGHVAHGKSTV---VKAISGVQTVRFKNELERNI----------- 76
            |:.|..|.. .::..:|:..||||..||||:   :..::|:...|...:.||..           
Zfish   139 KVVPTQPNA-PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLS 202

  Fly    77 --------------TIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVR 127
                          |:::|.|..:..|                                     :
Zfish   203 WALDTNQEERDKGKTVEVGRAYFETEK-------------------------------------K 230

  Fly   128 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP------QTSEHLAAIEIMKLKQILI 186
            |.:.:|.|||...:..|:.||:..|.|:|:|:..:...:.      ||.||....:...:|.:::
Zfish   231 HFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV 295

  Fly   187 LQNKIDLIKESQAKEQYEE-------ITKFVQGTVAEGAPIIPIS----AQLKYNIDVLCEYI-- 238
            |.||:|....:.:.|:|||       ..|.|.....:....:|.|    |.||...:....|.  
Zfish   296 LVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPRKDVHFMPCSGLNGANLKEPAENCPWYTGL 360

  Fly   239 -----VNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPG 298
                 ::.:|...|..:.|.||.::..:         .|: |.|..|.:.||.:...|::.:.|.
Zfish   361 PFIPHLDSLPNFNRSSDGPVRLPIVDKY---------KDM-GTVILGKLESGSIGKAQQLVMMPN 415

  Fly   299 VVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTK------IDP--TLCRADRLV-- 353
            ..|.:             ::||.:::.|...|.||..:.:..|      |.|  .||.|:.|.  
Zfish   416 RHTVE-------------VLSLLSDEVETDEAGPGENLKLRLKGIEEEEILPGFILCNAENLCHT 467

  Fly   354 -----GQVL------------GAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNE 401
                 .|::            .||..:....:|::|:..:.  |:..:| |||...|...:::::
Zfish   468 GRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALIC--LVDKKT-GDKSKTRPRFVKQDQ 529

  Fly   402 ILLVNIGSLSTGGRIS-ATKGDLAKIVLTTPVCTEKGEKIALSR 444
            :.   |..|.|.|.|. .|..|..::...|  ..::|:.||:.:
Zfish   530 VC---IARLRTAGTICLETFKDFPQMGRFT--LRDEGKTIAIGK 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 102/499 (20%)
gspt1lNP_942101.1 TEF1 150..572 CDD:227581 99/487 (20%)
EF1_alpha 154..370 CDD:206670 50/252 (20%)
eRF3_II 379..460 CDD:293906 22/103 (21%)
eRF3_C_III 466..572 CDD:294003 22/111 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592516
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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