DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF2gamma and Gspt1

DIOPT Version :10

Sequence 1:NP_731993.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001003978.1 Gene:Gspt1 / 24420 RGDID:2751 Length:636 Species:Rattus norvegicus


Alignment Length:495 Identity:98/495 - (19%)
Similarity:181/495 - (36%) Gaps:148/495 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LSPEVISRQATINIGTIGHVAHGKSTV---VKAISGVQTVRFKNELERNI--------------- 76
            ::|....::..:|:..||||..||||:   :..::|:...|...:.||..               
  Rat   201 VAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALD 265

  Fly    77 ----------TIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSF 131
                      |:::|.|..:..|                                     :|.:.
  Rat   266 TNQEERDKGKTVEVGRAYFETEK-------------------------------------KHFTI 293

  Fly   132 VDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP------QTSEHLAAIEIMKLKQILILQNK 190
            :|.|||...:..|:.||:..|.|:|:|:..:...:.      ||.||....:...:|.:::|.||
  Rat   294 LDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINK 358

  Fly   191 IDLIKESQAKEQYEE-------ITKFVQGTVAEGAPIIPIS----AQLKYNIDVLCEYI------ 238
            :|....:.:.|:|||       ..|.|.....:....:|.|    |.||...|....||      
  Rat   359 MDDPTVNWSNERYEECKEKLIPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIP 423

  Fly   239 -VNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPGVVTK 302
             ::.:|...|..:.|.||.::..:         .|: |.|..|.:.||.:..||::.:.|     
  Rat   424 YLDNLPNFNRSVDGPIRLPIVDKY---------KDM-GTVVLGKLESGSICKGQQLVMMP----- 473

  Fly   303 DSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTK------IDP--------TLCRADRLV 353
             :..|:       .::.:.::..|.....||..:.:..|      |.|        .||.:.|..
  Rat   474 -NKHNV-------EVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTF 530

  Fly   354 -GQVL------------GAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNEILLV 405
             .|::            .||..:....:|:||:..:   .|..:..|:|...|...::::::.  
  Rat   531 DAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALI---CLVDKKSGEKSKTRPRFVKQDQVC-- 590

  Fly   406 NIGSLSTGGRIS-ATKGDLAKIVLTTPVCTEKGEKIALSR 444
             |..|.|.|.|. .|..|..::...|  ..::|:.||:.:
  Rat   591 -IARLRTAGTICLETFKDFPQMGRFT--LRDEGKTIAIGK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_731993.1 PTZ00327 11..465 CDD:240362 98/495 (20%)
Gspt1NP_001003978.1 PAM2 63..79 CDD:429316
TEF1 206..635 CDD:444074 97/490 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.