DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and eefsec

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_002933127.3 Gene:eefsec / 100489728 XenbaseID:XB-GENE-1010963 Length:576 Species:Xenopus tropicalis


Alignment Length:487 Identity:115/487 - (23%)
Similarity:197/487 - (40%) Gaps:128/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RQATINIGTIGHVAHGKSTVVKAIS-GVQTVRF-KN--ELERNITIKLGYANAKIYKCDNPKCPR 97
            |....|:|.:||:..||:::.||:| ...|..| ||  ..||.||:.||:::..:        |.
 Frog     6 RTLNFNVGVLGHIDSGKTSLAKALSTTASTAAFDKNPQSKERGITLDLGFSSFSV--------PI 62

  Fly    98 PASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE 162
            |                ..|..:|..||  ..:.||||||..|:.|::.||.::|..:|:|...:
 Frog    63 P----------------EHLAGTGYQRL--QFTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTK 109

  Fly   163 SCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITKFVQGTVA----EGAPIIPI 223
            .. |.|::|.|...:|...|.:::| |||||:.|::.:...:::||.:|.|:.    .|:|||.:
 Frog   110 GM-QTQSAECLVIGQIACNKMVVVL-NKIDLLAENKRQAAIDKMTKKMQKTLENTKFHGSPIISV 172

  Fly   224 SAQ----------LKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVA 278
            :|:          ....:..|.|.:::...:|.||...|..:.|...|.:..        :|.|.
 Frog   173 AAKPGGPEAPESVTGLGVSDLIELLMSHTYLPQRDPQGPFLMAVDHCFSIKG--------QGTVM 229

  Fly   279 GGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGV-GTKI 342
            .|:||||.:.:...:|:....|||    .:....:|.:.||         .||.|..:|: .|:.
 Frog   230 TGTILSGSISLNDNVEIPALKVTK----KVKSMQMFHKPVS---------QAVQGDRLGICVTQF 281

  Fly   343 DPTL------CRADRL--VGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQK 399
            ||.|      |..:.|  :...:.:|.::|         ||              ||:...|.:.
 Frog   282 DPKLLERGLVCTPESLHTIHAAIISVNKIP---------YY--------------KGSLQTKAKF 323

  Fly   400 N----------EILLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALSRRVENH----- 449
            :          ::...::...|....:.|...|..|..|.......|..|.:...:|:||     
 Frog   324 HITVSHETVMAKVTFFSLPPASFNEELPANVFDFGKEYLYQDGYISKDSKNSEQNKVDNHQGEEA 388

  Fly   450 -----WRLIGWGQ---------IFGGKTITPV 467
                 |.|:.:.:         :.|.|..|.:
 Frog   389 IPKQQWALLEFEKPVTCPKLCLVIGSKLDTDI 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 114/483 (24%)
eefsecXP_002933127.3 SelB_euk 10..201 CDD:206676 62/218 (28%)
SelB_II 212..294 CDD:293897 25/102 (25%)
eSelB_III 299..433 CDD:294009 22/145 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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