DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42404 and Dgcr2

DIOPT Version :10

Sequence 1:NP_650437.4 Gene:CG42404 / 41842 FlyBaseID:FBgn0259823 Length:1133 Species:Drosophila melanogaster
Sequence 2:NP_034178.2 Gene:Dgcr2 / 13356 MGIID:892866 Length:549 Species:Mus musculus


Alignment Length:236 Identity:70/236 - (29%)
Similarity:100/236 - (42%) Gaps:71/236 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SCRDYNGKMYETGMHYMP-GPDSCRLCICDSGLPKACKMVLCEAFSKCKSFQTVGSGNNCCEVIC 91
            :|.|....:.:.|.::.| |.|.|..|.|..|.|:.|...|||....|:.::.  ....||:.:|
Mouse   269 TCVDIKDNVVDEGFYFTPKGDDPCLSCTCHRGEPEMCVAALCERPQGCQQYRK--DPKECCKFMC 331

  Fly    92 LDDQFSDGSTDF-----GIXLVASGITATLSLSLLFFLVNRLRQRKMRARENRQNAEDQRSIVGS 151
            ||   .|||:.|     |:.||.|.|::.|.||||.|:|:|||||:      |:..|   |::|:
Mouse   332 LD---PDGSSLFDSMASGMRLVVSCISSFLILSLLLFMVHRLRQRR------RERIE---SLIGA 384

  Fly   152 -----------IGYIAGNMGYMEGNLSAIDYSYSG--------------AATHYP-LWKPHFPRG 190
                       .|:..|..|:..| |:.:..|..|              .|..|| :.:|..|  
Mouse   385 NLHHFNLGRRIPGFDYGPDGFGTG-LTPLHLSDDGEGGTFHFHDPPPPYTAYKYPDMDQPDDP-- 446

  Fly   191 EAPPPYEEAV-------------AISQAEALSAQCTVSLPA 218
              |||||.::             |....||       ||||
Mouse   447 --PPPYEASINPDSVFYDPADDDAFEPVEA-------SLPA 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42404NP_650437.4 VWC 32..89 CDD:214564 16/57 (28%)
Dgcr2NP_034178.2 LDLa 30..66 CDD:238060
CLECT_DGCR2_like 114..266 CDD:153069
VWC 270..328 CDD:214564 17/59 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..549 18/74 (24%)
Blue background indicates that the domain is not in the aligned region.

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