DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amt and MEP2

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_014257.1 Gene:MEP2 / 855580 SGDID:S000005086 Length:499 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:144/525 - (27%)
Similarity:226/525 - (43%) Gaps:82/525 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YDLSVEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSF 85
            :||:  :..|:..:|..::.|..|.|:|.||....|:.::::..:::...:..|.::.:||.::|
Yeast    27 FDLA--NMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYSLAF 89

  Fly    86 GRGPLSNPFIAIGDF-----LLDPPVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 145
            ......|.||...:|     :|..|...:.:..|..| ::|..||.....::.|...||......
Yeast    90 SHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFA-VYQGMFAAVTGALMLGGACERARLFPM 153

  Fly   146 CLFSFL-NTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGRYSEG 209
            .:|.|| .|.|||..|.|||...|:|.|||::|.||...|||..|......|.:||.|       
Yeast   154 MVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILGKR------- 211

  Fly   210 YDP-----LPLGNP---VNACMGLFVLWWGWLAFNSGSTYGVSGAKWQYAARAAVMTMMGSFGGG 266
            .||     :|...|   .:..:|...||:||:.||.||....:...|.    :.:.|.:.:..||
Yeast   212 NDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWY----SIMSTNLAAACGG 272

  Fly   267 FTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRAWEALVIGAIGSLFCVLAMPLFDRMG 331
            .|..:..::|.|.....:.|.:|::..||.||........|.|:|||.:....|.||:.|...:.
Yeast   273 LTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLR 337

  Fly   332 VDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGLFKG---GGWY-----LLGIQTLSA 388
            :||.:...::|||.|..|.:..|:||     .|..|..:|.:..   |||.     .:|.| |:.
Yeast   338 IDDGLDCYSIHGVGGCIGSVLTGIFA-----ADYVNATAGSYISPIDGGWINHHYKQVGYQ-LAG 396

  Fly   389 LCLA-CWGVCSTFLLLYVINKI--IPIRMDPHEELLGADLTEHRIRHSQIGLSRAISALAPIKVD 450
            :|.| .|.|..|.:||..:|.|  :.:|:...||.||.|.       :|||......:.|.|...
Yeast   397 ICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDA-------AQIGEFTYEESTAYIPEP 454

  Fly   451 LKDIAGIQPIGINPGHERSIDQLRAAEDKLQQWQSYLEQVSGSRANVKMDAGQSHADINFKPRTA 515
            ::.....|   :.|.|| :||      ||:                    .|.:.|:.|..|..|
Yeast   455 IRSKTSAQ---MPPPHE-NID------DKI--------------------VGNTDAEKNSTPSDA 489

  Fly   516 GNVFN 520
            .:..|
Yeast   490 SSTKN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 123/422 (29%)
MEP2NP_014257.1 AmtB 27..447 CDD:223083 128/446 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346801
Domainoid 1 1.000 161 1.000 Domainoid score I849
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 162 1.000 Inparanoid score I1052
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 1 1.000 - - otm46755
orthoMCL 1 0.900 - - OOG6_100186
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16229
SonicParanoid 1 1.000 - - X200
TreeFam 1 0.960 - -
1110.680

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