DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and MEP1

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_011636.3 Gene:MEP1 / 853019 SGDID:S000003353 Length:492 Species:Saccharomyces cerevisiae


Alignment Length:531 Identity:132/531 - (24%)
Similarity:215/531 - (40%) Gaps:104/531 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPF 94
            :::..:.::|.|..|.|.|.||....|:.:.::...::..::|...::.:||.::|.:...:|.|
Yeast    21 FMILGAALVFFMVPGLGFLYSGLARRKSALALIWVVLMATLVGILQWYFWGYSLAFSKSAPNNKF 85

  Fly    95 IA-IGDFLLDPPVG-----DALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAYCLFSF-LN 152
            |. :..|......|     ||.....:|.  ||:.|:....:|::||.|||.....:.:|.| |.
Yeast    86 IGNLDSFGFRNVYGKKFDEDAYPELAYAT--FQMMFSCVNLSIIAGATAERGRLLPHMVFLFILA 148

  Fly   153 TAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGRYSEGYDPLPLGN 217
            |..||....|:|...|:..:.|.:|.||.|.:.::...|.|..:..||.|..:....:.|   .|
Yeast   149 TIGYCPVTYWIWSPGGWAYQWGVLDWAGGGNIEILSAVSGFVYSWFLGKRNEKLLINFRP---HN 210

  Fly   218 PVNACMGLFVLWWGWLAFNSGSTYGVSGAKWQYAARAAVMTMMGSFGGGFTSSIYSF-----WRH 277
            .....:|..:||:|||.|||.|:...:    ..:..|.:.|.:.:..||.|..:..:     |..
Yeast   211 VSLVTLGTSILWFGWLLFNSASSLSPN----LRSVYAFMNTCLSAITGGMTWCLLDYRSEKKWST 271

  Fly   278 GGGMDIMDLINGVLGSLVSIT--AGCF-LYRAWEALVIGAIGSLFCVLAMPLFDRMGVDDPVGAS 339
            .|      |.:|::..||:.|  :||. ||   .:|:.|.:..:.|..|..|.....|||.:...
Yeast   272 VG------LCSGIISGLVAATPSSGCITLY---GSLIQGIVAGVVCNFATKLKYYAKVDDAMDIL 327

  Fly   340 AVHGVCGIWGVIAVGLF-ADNPIPLDTTNGRSGLFKGGGWYLLGIQTL---SALCLACWGVCS-- 398
            |.|||.|:.|:|...|| ||..|.:|.|....     |||.....:.:   .|...|..|..:  
Yeast   328 AEHGVAGVIGLIFNALFGADWVIGMDGTTEHE-----GGWVTHNYKQMYKQIAYIAASIGYTAAV 387

  Fly   399 TFLLLYVINKIIPIRMDPHEELLGADLTEHRIRHSQIGLSRAISALAPIKVDLKDIAGIQPIGIN 463
            |.::.:|:..|..:|:...||...|.:.|     .|||                           
Yeast   388 TAIICFVLGYIPGMRLRISEEAEEAGMDE-----DQIG--------------------------- 420

  Fly   464 PGHERSIDQLRAAEDKLQQWQSYLEQVSGSRANVKMDAGQSHADINFKPRTAGNVFNRRIPARKS 528
               |.:.|.:....|      .||..|         |.....:|:|.:      |.|..:.|.:|
Yeast   421 ---EFAYDYVEVRRD------YYLWGV---------DEDSQRSDVNHR------VNNAHLAAERS 461

  Fly   529 ISGGLYRSNNS 539
            .||    :|:|
Yeast   462 SSG----TNSS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 111/418 (27%)
MEP1NP_011636.3 amt 19..424 CDD:273292 116/460 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346799
Domainoid 1 1.000 161 1.000 Domainoid score I849
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 162 1.000 Inparanoid score I1052
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 1 1.000 - - otm46755
orthoMCL 1 0.900 - - OOG6_100186
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
TreeFam 1 0.960 - -
109.650

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