DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and AMT1;2

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_176658.1 Gene:AMT1;2 / 842786 AraportID:AT1G64780 Length:514 Species:Arabidopsis thaliana


Alignment Length:453 Identity:153/453 - (33%)
Similarity:229/453 - (50%) Gaps:52/453 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NHSNYVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFT 75
            |.||.:....|.:   |..::|.|::::|.||.||.||.:|.|..||.:|||:.||:|...|..:
plant    39 NISNKLSDTTYAV---DNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGAIS 100

  Fly    76 YWLFGYGMSFGRGPLSNPFI-------AIGDFLLDPPVGDALMGQIFAAFLFQLSFATTATTIVS 133
            |:|||:..:||..  ||.||       |:..:...|       |..|:.||:|.:||..|..|.|
plant   101 YYLFGFAFAFGTP--SNGFIGRHHSFFALSSYPERP-------GSDFSFFLYQWAFAIAAAGITS 156

  Fly   134 GAMAERCNFKAYCLFS-FLNTAVYCIPAGWVWGEHGFL------NKL----GAVDIAGSGPVHLI 187
            |::|||..|.||.::| ||...||...:.|.|...|:.      |.|    ||:|.||||.||::
plant   157 GSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSGAIDFAGSGVVHMV 221

  Fly   188 GGASAFASAAMLGPRLGRYSEGYDPLPL-GNPVN-ACMGLFVLWWGWLAFNSGS----------- 239
            ||.:....|.:.|||:||:......:.| |:..: ..:|.|:||:||..||.||           
plant   222 GGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTILKGYDKS 286

  Fly   240 --TYGVSGAKWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCF 302
              .||    :|....|.||.|.:.......| :::|.....|..:::|:.||:||...:||:||.
plant   287 RPYYG----QWSAVGRTAVTTTLSGCTAALT-TLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCA 346

  Fly   303 LYRAWEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTN 367
            :...|.|:|.|.:.|...:....|..::..|||:.|:.:||.||.||:|..||||......:..:
plant   347 VVEPWAAIVCGFVASWVLIGFNLLAKKLKYDDPLEAAQLHGGCGAWGLIFTGLFARKEYVNEIYS 411

  Fly   368 GRS--GLFKGGGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELLGADLTEH 428
            |..  |||.|||..||..|.:..:.:..|...:...|.|.::|:..:|:...:|:.|.|:|.|
plant   412 GDRPYGLFMGGGGKLLAAQIVQIIVIVGWVTVTMGPLFYGLHKMNLLRISAEDEMAGMDMTRH 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 147/432 (34%)
AMT1;2NP_176658.1 amt 53..479 CDD:273292 148/436 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 248 1.000 Domainoid score I531
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I1032
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 1 1.000 - - otm2514
orthoMCL 1 0.900 - - OOG6_100186
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X200
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

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