DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and AMT1;4

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_194599.1 Gene:AMT1;4 / 828988 AraportID:AT4G28700 Length:504 Species:Arabidopsis thaliana


Alignment Length:437 Identity:148/437 - (33%)
Similarity:220/437 - (50%) Gaps:49/437 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG---RG 88
            |..::|.|::::|.||.||.||.:|.|..||.:|||:.||||...||..|:|||:..:||   .|
plant    51 DNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAFGSPSNG 115

  Fly    89 PLSNPFIAIGDFLLDPPVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAYCLF-SFLN 152
            .:...|..:.||  ..|..|      :..||:|.:||..|..|.||::|||..|.||.:: |||.
plant   116 FIGKHFFGMYDF--PQPTFD------YPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSSFLT 172

  Fly   153 TAVYCIPAGWVWGEHGF---------LNKLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGRYSE 208
            ..||.|.:.|.|...|:         |.:.|.:|.||||.||::||.:....|.:.|||:||:..
plant   173 GLVYPIVSHWFWSSDGWASPARSENLLFQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGV 237

  Fly   209 GYDPLPL-GNPVN-ACMGLFVLWWGWLAFNSGS------TYGVSG-----AKWQYAARAAVMTMM 260
            |..|:.| |:... ..:|.|:||:||..||.||      .||.:.     .:|....|.||.|.:
plant   238 GGKPVTLRGHSATLVVLGTFLLWFGWYGFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAVTTTL 302

  Fly   261 GSFGGGFTS-----SIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRAWEALVIGAIGSLFC 320
            .......|:     .|..:|      ::.|:.||:||...:||:||.:...|.|||.|.:.:...
plant   303 AGCTAALTTLFGKRLIDGYW------NVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAAWVL 361

  Fly   321 VLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRS----GLFKGGGWYLL 381
            :....|.:::..|||:.|:.:||.||.||:|..||||:.....:...|..    ||..|||..||
plant   362 MGCNRLAEKLQFDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMGGGGRLL 426

  Fly   382 GIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELLGADLTEH 428
            ....:..|.:..|...:...|.::::|:..:|:...:|:.|.|.|.|
plant   427 AAHVVQILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSH 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 146/432 (34%)
AMT1;4NP_194599.1 amt 52..478 CDD:273292 147/436 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 248 1.000 Domainoid score I531
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I1032
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 1 1.000 - - otm2514
orthoMCL 1 0.900 - - OOG6_100186
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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