DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and AMT1;1

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_193087.1 Gene:AMT1;1 / 826983 AraportID:AT4G13510 Length:501 Species:Arabidopsis thaliana


Alignment Length:463 Identity:161/463 - (34%)
Similarity:240/463 - (51%) Gaps:52/463 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGTVGAPRNHSNYVIPGLYDLSVE--------DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEV 59
            |.|..|     ||:...|.|::.:        |..::|.|::::|:||.||.||.:|.|..||.:
plant    15 NATAAA-----NYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 74

  Fly    60 NIMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFIAIGDF-LLDPPVGDALMGQIFAAFLFQLS 123
            |||:.||:|...||..|:||||..:|| .| ||.||....| |.|.|...|    .::.||:|.:
plant    75 NIMLTNVLDAAAGGLFYYLFGYAFAFG-SP-SNGFIGKHYFGLKDIPTASA----DYSNFLYQWA 133

  Fly   124 FATTATTIVSGAMAERCNFKAYCLF-SFLNTAVYCIPAGWVWGEHGF----------LNKLGAVD 177
            ||..|..|.||::|||..|.||.:: |||...||.:.:.|.|...|:          |...||:|
plant   134 FAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDLLFSTGAID 198

  Fly   178 IAGSGPVHLIGGASAFASAAMLGPRLGRYSEGYDPLPL-GNPVN-ACMGLFVLWWGWLAFNSGS- 239
            .||||.||::||.:....|.:.||||||:..|...:.| |:..: ..:|.|:||:||..||.|| 
plant   199 FAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALRGHSASLVVLGTFLLWFGWYGFNPGSF 263

  Fly   240 -----TY--GVSGAKWQYAARAAVMTMMGSFGGGFTSSIYSFWRH---GGGMDIMDLINGVLGSL 294
                 ||  |....:|....|.||.|.:    .|.|:::.:.:..   .|..::.|:.||:||..
plant   264 NKILVTYETGTYNGQWSAVGRTAVTTTL----AGCTAALTTLFGKRLLSGHWNVTDVCNGLLGGF 324

  Fly   295 VSITAGCFLYRAWEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFAD- 358
            .:||.||.:...|.|::.|.:.:|..:....|.:::..|||:.|:.:||.||.||:|...|||. 
plant   325 AAITGGCSVVEPWAAIICGFVAALVLLGCNKLAEKLKYDDPLEAAQLHGGCGAWGLIFTALFAQE 389

  Fly   359 ---NPIPLDTTNGRSGLFKGGGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEEL 420
               |.|..:......|||.|||..|||.|.:..:.:..|...:...|.:::.|:..:|:...:|:
plant   390 KYLNQIYGNKPGRPHGLFMGGGGKLLGAQLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEM 454

  Fly   421 LGADLTEH 428
            .|.|:|.|
plant   455 AGMDMTRH 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 152/426 (36%)
AMT1;1NP_193087.1 amt 43..467 CDD:273292 153/430 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 248 1.000 Domainoid score I531
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I1032
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 1 1.000 - - otm2514
orthoMCL 1 0.900 - - OOG6_100186
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X200
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

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