DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and AMT2

DIOPT Version :10

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_181363.1 Gene:AMT2 / 818409 AraportID:AT2G38290 Length:475 Species:Arabidopsis thaliana


Alignment Length:458 Identity:126/458 - (27%)
Similarity:181/458 - (39%) Gaps:85/458 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GLYD---------LSVEDTNWVLTSSFII-FTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGG 73
            |.||         |:..|..|.||::.:: .....|..:|.:..|..|..||.....:.......
plant     3 GAYDPSLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVL 67

  Fly    74 FTYWLFGYGMSFGRGPLSNPFIAIGDFLLDPPVGDA--LMGQ-------IFAAFL-------FQL 122
            ..:.|..|.|:||...|  ||...|.     |..|.  |.||       :.|.:.       ||.
plant    68 LCWVLLCYKMAFGEELL--PFWGKGG-----PAFDQGYLKGQAKIPNSNVAAPYFPMATLVYFQF 125

  Fly   123 SFATTATTIVSGAMAERCNFKA-------YCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAG 180
            :||...|.:|:|::..|.|.||       :.:||      |.:.|..:|| .|||.:.|.:|.:|
plant   126 TFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFS------YTVGAYSIWG-GGFLYQWGVIDYSG 183

  Fly   181 SGPVHLIGGASAFASAAMLGPRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTY---- 241
            ...:||..|.:.|.:|..:|||.....|.:.|   .|.:....|..:||.||..||.|:.|    
plant   184 GYVIHLSSGVAGFVAAYWVGPRPKADRERFPP---NNVLLMLAGAGLLWMGWSGFNGGAPYAANL 245

  Fly   242 ----GVSGAKWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCF 302
                .|.......|....|.|         |..:..|    |...::..|.|::..|..:|.|..
plant   246 TSSIAVLNTNLSAATSLLVWT---------TLDVIFF----GKPSVIGAIQGMVTGLAGVTPGAG 297

  Fly   303 LYRAWEALVIGAIGSLFCVLAMPLFDRMG-----VDDPVGASAVHGVCGIWGVIAVGLFADNP-- 360
            |.:.|.|::||.:.......:|.:..:..     |||.:.....|.|.|:.|.|..|||| :|  
plant   298 LIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLFA-HPDL 361

  Fly   361 ----IPLDTTNGRSGLFKGGGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELL 421
                :||..|.|  ..:.|.|...|..|...|..:|.|.|.||.::|..|...||:||...|..:
plant   362 CVLVLPLPATRG--AFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLRMAEEELGI 424

  Fly   422 GAD 424
            |.|
plant   425 GDD 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 AmtB 27..431 CDD:439775 122/441 (28%)
AMT2NP_181363.1 amt 21..435 CDD:273292 121/440 (28%)

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