DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amt and Rhcg

DIOPT Version :10

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_062773.2 Gene:Rhcg / 56315 MGIID:1888517 Length:498 Species:Mus musculus


Alignment Length:402 Identity:87/402 - (21%)
Similarity:146/402 - (36%) Gaps:84/402 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LSVEDTNWVLTSSFIIFTMQT-GFGMLESGCVSIKNEVN-------IMMKNVIDIVLGGFTY--- 76
            |.::.|..||...|:.:.:|. ....||....:|.::|.       ...::|..:|..||.:   
Mouse    16 LILQVTMVVLFGVFVRYDIQADAHWWLEKKRKNISSDVENEFYYRYPSFQDVHAMVFVGFGFLMT 80

  Fly    77 WLFGYGMSFGRGPLSNPFIAIG-DFLLDPPVGDALMGQIFAAF-------------------LFQ 121
            :|..||           |.|:| :|||      |..|..:|..                   :.|
Mouse    81 FLQRYG-----------FSAVGFNFLL------AAFGIQWALLMQGWFHYFEEGHIVLSVENIIQ 128

  Fly   122 LSFATTATTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHL 186
            ..|...::.:..||:..:.:.....:.:|....::.:      .|...||.:.|.|..||..:|.
Mouse   129 ADFCVASSCVAFGAVLGKVSPMQLLIMTFFQVTLFTV------NEFILLNLIEAKDAGGSMTIHT 187

  Fly   187 IGGASAFASAAM--------LGPRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTYGV 243
            .|   |:....:        |.....|.|..|.     :.:.|.:|...||..|.:|||.|::..
Mouse   188 FG---AYFGLTVTWILYRKNLDQSKQRQSSVYH-----SDLFAMIGTLFLWIYWPSFNSASSFHG 244

  Fly   244 SGAKWQYAARAAVMTMMGSFGGGFTS-SIYSFWRHGGGMDIMDLINGVLGSLVSI-TAGCFLYRA 306
            ....     |||:.|.:.......|: ::.|.....|.:|::.:.|..|...|.: ||...:...
Mouse   245 DAQH-----RAALNTYLSLAASVLTTVTVSSIVHKKGKLDMVHIQNATLAGGVGVGTAAEMMLTP 304

  Fly   307 WEALVIGAIGSLFCVLAMP-----LFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 366
            :.||::|....:|..|...     |..|..:.|..|...:||:.||.|.|...:.|....|  ..
Mouse   305 YGALIVGFFCGIFSTLGFAYLTPFLESRHRIQDTCGIHNLHGIPGIIGGIVGAVTAAYSSP--DV 367

  Fly   367 NGRSGLFKGGGW 378
            .|..|:....|:
Mouse   368 YGEPGIVHSFGF 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 AmtB 27..431 CDD:439775 86/398 (22%)
RhcgNP_062773.2 Ammonium_transp 61..436 CDD:445985 77/357 (22%)

Return to query results.
Submit another query.