DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and rhd

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001019990.1 Gene:rhd / 554272 ZFINID:ZDB-GENE-051213-1 Length:423 Species:Danio rerio


Alignment Length:417 Identity:86/417 - (20%)
Similarity:152/417 - (36%) Gaps:98/417 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IIFTMQTGFGMLESGCVSI------KNEVNIMMKNVID------IVLGGFTY---WLFGYGMSFG 86
            :.|.::|.|.:|....|.|      ::|....:.:..|      ::..||.:   :|..||:| |
Zfish    16 VAFLLETLFLLLFVFWVKIEKQEYRRSESEPFVHSYADFQDVHVMIFMGFGFLATFLVRYGLS-G 79

  Fly    87 RGPLSNPFIA---------IGDFLLDPPVGDALMGQIFAAF--LFQLSFATTATTIVSGAMAERC 140
            .|  .|..:|         :..|||  |......|||..:.  :.:...:|.:..|..||:..:.
Zfish    80 SG--FNVLLAAMAVQWAVLMNGFLL--PQHRHHRGQIHISMKSVIEAELSTASALIAIGAVHGKT 140

  Fly   141 NFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGR 205
            |.....|.|.:....:.:.. |:.......:.|.::.:     :|:.|.......:.:|      
Zfish   141 NPVQLLLMSLVEVTGFVVNQ-WILRTLLHADALYSIML-----LHIFGSLFGVMVSWVL------ 193

  Fly   206 YSEGYDPLPLGNPVNACMGLFV------LWWGWLAFNSGSTYGVSGAKWQYAARAAVMTMMGSFG 264
            :.||..|.......:...|||.      :|..|.:|||    .:..::|:.|.|..|:.      
Zfish   194 HREGIKPHHEKEKTDRKTGLFAMFGTLFMWMFWPSFNS----ALLSSRWERALRLTVIY------ 248

  Fly   265 GGFTS---------SIYSFWRHGGGMDIMDLINGVLGSLVSI-TAGCFLYRAWEALVIGAIGSLF 319
            |.:.|         |:.......|.|:::.:.:..|.:.|:| .|...:...|.|:|||...||.
Zfish   249 GTYLSLAVSVVVAMSVSMLTSSKGKMNMVHVQSSALSAGVAIGVAMTAVSEPWVAMVIGFCASLL 313

  Fly   320 CVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGLFKGGGWY----- 379
            ..|..    |...:..:.|...|..||:..|        :.||        |:.   ||:     
Zfish   314 SGLGF----RYMKNHMLFAFECHDTCGVLNV--------HTIP--------GIL---GWFAHLCL 355

  Fly   380 -LLGIQTLSALCLACWGVCSTFLLLYV 405
             |..::...|:..|.:.:|...:.|.|
Zfish   356 RLASMEGTVAVQFAVYHICVLLITLCV 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 86/417 (21%)
rhdNP_001019990.1 Ammonium_transp 49..351 CDD:275788 73/351 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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