DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amt and RHCG

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001307970.1 Gene:RHCG / 51458 HGNCID:18140 Length:479 Species:Homo sapiens


Alignment Length:448 Identity:102/448 - (22%)
Similarity:162/448 - (36%) Gaps:102/448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RNHSN---------YVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKN 65
            |.|.|         |..|...|:.|           ::|   .|||.|          :..:.:.
Human    44 RTHKNLSDMENEFYYRYPSFQDVHV-----------MVF---VGFGFL----------MTFLQRY 84

  Fly    66 VIDIVLGGFTYWLFGYGMSFG---RG---PLSNPFIAIGDFLLDPPVGDALMGQIFAAFLFQLSF 124
            ....|  ||.:.|..:|:.:.   :|   .|.:.:|.:|                 ...|....|
Human    85 GFSAV--GFNFLLAAFGIQWALLMQGWFHFLQDRYIVVG-----------------VENLINADF 130

  Fly   125 ATTATTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGG 189
            ...:..:..||:..:.:.....:.:|....::.:      .|...||.|...|..||..:|..|.
Human   131 CVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAV------NEFILLNLLKVKDAGGSMTIHTFGA 189

  Fly   190 ASAFASAAMLGPRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTY-GVSGAKWQYAAR 253
            ........:|..|....|:........:.:.|.:|...||..|.:|||..:| |.|    |:  |
Human   190 YFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS----QH--R 248

  Fly   254 AAVMTMMGSFGGGFTS-SIYSFWRHGGGMDIMDLINGVLGSLVSI-TAGCFLYRAWEALVI---- 312
            ||:.|.........|| :|.|.....|.:|::.:.|..|...|:: ||...:...:.||:|    
Human   249 AAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVC 313

  Fly   313 GAIGSLFCVLAMPLFD-RMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGL---- 372
            |.|.:|..|...|..: |:.:.|..|.:.:||:.||.|.| ||........|: ..|:.||    
Human   314 GIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGI-VGAVTAASASLE-VYGKEGLVHSF 376

  Fly   373 -FKG--GGW--------YLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEE 419
             |:|  |.|        .:.|:  |..|.:|..|.....|:|.     :|....|.:|
Human   377 DFQGFNGDWTARTQGKFQIYGL--LVTLAMALMGGIIVGLILR-----LPFWGQPSDE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 95/419 (23%)
RHCGNP_001307970.1 Ammonium_transp 60..435 CDD:322161 98/432 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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