DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and rhbg

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_012823751.2 Gene:rhbg / 496595 XenbaseID:XB-GENE-1009286 Length:460 Species:Xenopus tropicalis


Alignment Length:439 Identity:89/439 - (20%)
Similarity:151/439 - (34%) Gaps:133/439 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNNGTVGAPRNHSNYVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLES-----GCVSIKNEVN 60
            |.|.:|....|...:..|...|:.|           :||   .|||.|.:     |..|:     
 Frog    46 MRNHSVQNAENDFYFRYPSFQDVHV-----------MIF---IGFGFLMTFLKRYGFSSV----- 91

  Fly    61 IMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFIAIGDFLLDPPVGDALMGQIFAAF------- 118
                        .|.:.:..:|:.:                      ..|:...|..|       
 Frog    92 ------------AFNFLIAAFGLQW----------------------STLIQGFFHGFHDGKIHV 122

  Fly   119 ----LFQLSFATTATTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIA 179
                :....|.|.|..|..||:..:.:.....:.:.:...::.|      .|:..||.:||.|..
 Frog   123 GIESMINADFCTGAVLISFGAVLGKTSPVQLIVMTLIEVTLFGI------NEYIILNIVGAKDAG 181

  Fly   180 GSGPVHLIGGASAFASAAML---GPRLGRYSEG--YDPLPLGNPVNACMGLFVLWWGWLAFNSGS 239
            ||..:|..|.......:.:|   .....|..||  |.     :.:.|.:|...||..|.:|||..
 Frog   182 GSMTIHTFGAYFGLIVSRVLYRDDLEKSRQREGSVYH-----SDLFAMIGTIYLWMFWPSFNSAI 241

  Fly   240 T-YG------VSGAKWQYAARAAVMTMMGSFGGGFTSSIYSFWRHG-GGMDIMDLINGVLGSLVS 296
            | :|      |....:..||     ..:.:||       :|...:| |.:|::.:.|..|...|:
 Frog   242 TAHGDDQHRTVMNTYYSLAA-----CTLATFG-------FSALLNGEGKLDMVHIQNAALAGGVA 294

  Fly   297 I-TAGCFLYRAWEALVIGAIGSLFCVLA----MPLFD-RMGVDDPVGASAVHGVCGIWGVI---A 352
            : |:|..:...:.|::.|.:..:..||.    .|:.| ::.:.|..|...:||:.||.|.:   .
 Frog   295 VGTSGEMMLTPFGAMIAGTLAGMISVLGYKYLTPVLDSKLKIQDTCGVHNLHGMPGILGALIGAI 359

  Fly   353 VGLFA---------DNPIPLDTTNGRS----------GLFKGGGWYLLG 382
            |.|.|         ::..||.:...|:          .|....|:.:||
 Frog   360 VALLATAEIYGAGMEDVFPLISDGSRTAKQQSLYQFLALLVALGFAILG 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 82/410 (20%)
rhbgXP_012823751.2 Ammonium_transp 62..420 CDD:413553 85/423 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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