DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and rhcg

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_012814245.1 Gene:rhcg / 445260 XenbaseID:XB-GENE-949430 Length:509 Species:Xenopus tropicalis


Alignment Length:378 Identity:79/378 - (20%)
Similarity:150/378 - (39%) Gaps:61/378 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 FGYGMSF----GRGPLSNPFIAIGDFLLDPPV-----------GDALMGQIFAAFLFQLSFATTA 128
            ||:.|:|    |.|.::..|: :..|.:...:           |..|:|   ...|....|...:
 Frog   111 FGFLMTFLKRYGFGSVAFNFL-LAAFGIQWAILMQGWFHTFKNGKILIG---VESLINADFCVGS 171

  Fly   129 TTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASAF 193
            ..|..||:..:.:.....:.:.....::.:.. |:     .||.|...|..||..:|..|.....
 Frog   172 VCIAFGAILGKVSPVQIMVMTLFQVTLFAVNE-WI-----LLNLLHVNDAGGSMTIHTFGAYFGL 230

  Fly   194 ASAAMLG-PRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTYGVSGAKWQYAA----- 252
            ..|.:|. |||.:.::....:.:.: :.:.:|...||..|.:|||..:|  .|.....||     
 Frog   231 TVAWILNRPRLKQTNDKEGSVYVSD-LFSMIGTLFLWMFWPSFNSAVSY--HGDAQHRAAINTYC 292

  Fly   253 --RAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSI-TAGCFLYRAWEALVIGA 314
              .|.|:|         |.:|.|.....|.::::.:.|..|...|:: ||...:...:.:|::|.
 Frog   293 SLAACVLT---------TVAISSVVNKKGKLEMVHIQNATLAGGVAVGTAAEMMLTPYGSLIVGF 348

  Fly   315 IGSLFCVLAMP-----LFDRMGVDDPVGASAVHGVCG-IWGVIAVGLFADNPIPLDTTNGRSGLF 373
            |..:...|...     |.:::.:.|..|...:|.:.| |.|::.....|.....:.|.:|...:|
 Frog   349 ICGIVSTLGFTYCSPFLSNKLRLHDTCGIHNLHAMPGLIGGIVGAVTAACATEAVYTADGLKKMF 413

  Fly   374 KGGGWY------LLGIQTLSALCLA-CWGVCSTFLLLYVINKIIPIRMDPHEE 419
            :..|.|      :.|....:.||:: .:|:....::..::.  :||..||.:|
 Frog   414 RFEGDYATRTPSMQGGYQAAGLCVSLAFGLVGGTVVGCILK--LPIWGDPSDE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 79/378 (21%)
rhcgXP_012814245.1 Ammonium_transp 97..472 CDD:383203 79/378 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16229
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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