DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and rhag

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_998010.1 Gene:rhag / 405771 ZFINID:ZDB-GENE-030131-8229 Length:436 Species:Danio rerio


Alignment Length:354 Identity:83/354 - (23%)
Similarity:133/354 - (37%) Gaps:86/354 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 TTATTIVS-GAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGG 189
            :|||.::| ||:..:.:.....:.:.|....:||      .|:..:..||..|:..|..:|..|.
Zfish   128 STATVLISFGAVLGKTSPVQLLIMTLLEITTFCI------NEYLVVEILGVSDVGASMTIHAFGA 186

  Fly   190 ASAFASAAML---GPRLGRYSEG--YDPLPLGNPVNACMGLFVLWWGWLAFNSG-STYGVSGAKW 248
            ....:.|.:|   |.|.|..::|  |.     :.:.|.:|...||..|.:|||. :|.|      
Zfish   187 YFGLSVARVLYRPGLRNGHDNDGSLYH-----SHLFAMIGTVYLWMFWPSFNSAIATPG------ 240

  Fly   249 QYAARAAVMTMMG----SFGGGFTSSIYSFWRHGGGMDIMDLINGVLGS---------------- 293
            .:..||.|.|...    :.....|||:.   ...|.:|::.:.|..|..                
Zfish   241 DHQLRAVVNTYFSLAACALAAYATSSLV---EKKGKLDMVHIQNATLAGGVAVGTCADMDIQPFG 302

  Fly   294 --LVSITAGCFLYRAWEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLF 356
              |:.||||          :|..:|  |..|...|..::|:.|..|...:||:.||.|.:| |:.
Zfish   303 AMLIGITAG----------IISTVG--FKFLTPILASKLGIQDTCGVHNLHGMPGILGGVA-GIL 354

  Fly   357 ADNPIPLDTTNGRSGLFKGGGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELL 421
            |   ..|....|.|..::..|       ..|:|..|..|...|.|::    ||..:...|.:...
Zfish   355 A---AALKRKEGVSPTYQAAG-------LASSLGFALVGGLITGLIM----KIPFLGQPPDQNCF 405

  Fly   422 GADL----------TEHRIRHSQIGLSRA 440
            ...:          ||.|:.|.....::|
Zfish   406 DDSIYWEVPEEEEETEERLTHGDYSKNKA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 79/340 (23%)
rhagNP_998010.1 Ammonium_transp 56..410 CDD:275788 78/328 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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