DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and Rh50

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster


Alignment Length:525 Identity:105/525 - (20%)
Similarity:176/525 - (33%) Gaps:154/525 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 MQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFIAIGDFLLDPP 105
            :..||..:|.|      ::::.::|:||..:..                 :.|.|::|       
  Fly   100 LMKGFLHMEGG------KISLSLENIIDADIAA-----------------AVPLISMG------- 134

  Fly   106 VGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFL 170
               ||:|:            ||...::..::.|...|.|                    .|:..|
  Fly   135 ---ALLGR------------TTPIQLLCMSVFEVALFAA--------------------NEYLAL 164

  Fly   171 NKLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGRYSEG-YDPLPLGNPVNACMGLFVLWWGWLA 234
            :.....|..||..||..|.....|.|.||.|...:...| .:.....:.:.|.:|...||..|.:
  Fly   165 HVFSICDCGGSITVHAFGAYFGLAVALMLRPASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPS 229

  Fly   235 FNSGSTYGVSGAKWQYAARAAVMTMMGSFGGGFTSSIYS-FWRHGGGMDIMDLINGVLGSLVSIT 298
            |||....|..|      .||.:.|.:.......|:.:.| ...|...:|::.:.|..|...|::.
  Fly   230 FNSVLADGAGG------ERAILNTFLSLAAATVTTFVVSALVSHENKLDMVHVQNSTLAGGVAVG 288

  Fly   299 AGC-FLYRAWEALVIGAIGSLFCVLAMP-----LFDRMGVDDPVGASAVHGVCGIWGVIAVGLFA 357
            ..| .|..|..|::||.|.....||...     :...:.:.|..|...:||:..:...||..::|
  Fly   289 TVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPWMTANLRLHDTCGVHNLHGMPALISAIASAIYA 353

  Fly   358 ------------DNPIP-LDTTNGRSGLFKGG---------GWYLLGIQTLSALCLACWGVCSTF 400
                        .:..| :..|||......||         |:.|.||..  .|.:|..|...|.
  Fly   354 SMATVGEYQSELQDIFPAMVGTNGTETKIMGGLGRNATSQAGYQLFGIAV--TLLIAIGGGILTG 416

  Fly   401 LLLYVINKIIPIRMDPHEELLGADLTEHRIRHSQIGLSRAISALAPIKVDLKDIAGIQPIGINPG 465
            .:|...| ...::.|.|          |:..|..                               
  Fly   417 AVLKYTN-FRNLKKDEH----------HQDEHYW------------------------------- 439

  Fly   466 HERSIDQLRAAEDKLQQWQSYLEQVSGSRANVKMDAGQSHADINFKPRTAGNVFNRRIPARK-SI 529
                  ::.|||:| :::.:.|.::....|.......||.|:.|::|....| :|..:||.. .:
  Fly   440 ------EVPAAENK-EEYLNMLAKLLDDDAAATNSNSQSAANFNWRPFLLRN-WNAIVPANNLYV 496

  Fly   530 SGGLY 534
            .|.|:
  Fly   497 RGALH 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 86/416 (21%)
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 83/394 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
44.020

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