DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and Rhcg

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_038961559.1 Gene:Rhcg / 293048 RGDID:727859 Length:520 Species:Rattus norvegicus


Alignment Length:427 Identity:96/427 - (22%)
Similarity:164/427 - (38%) Gaps:72/427 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LSVEDTNWVLTSSFIIFTMQT-GFGMLESGCVSIKNEVN-------IMMKNVIDIVLGGFTY--- 76
            |.::.|..||...|:.:.:|. ....||....:|.::|.       ...::|..:|..||.:   
  Rat    39 LILQVTMVVLFGVFVRYDIQADAHWWLEKKRKNISSDVENEFYYRYPSFEDVHAMVFVGFGFLMT 103

  Fly    77 WLFGYGMSFGRGPLSNPFIAIG-DFLLDP-PVGDALMGQIFAAF------------LFQLSFATT 127
            :|..||           |.|:| :|||.. .:..||:.|.:..|            |.|..|...
  Rat   104 FLQRYG-----------FSAVGFNFLLAAFGIQWALLMQGWFHFFEEGHILLSVENLIQADFCVA 157

  Fly   128 ATTIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASA 192
            :|.:..||:..:.:.....:.:|....::.:      .|...||.:.|.|..||..:|..|....
  Rat   158 STCVAFGAVLGKISPMQLLIMTFFQVTLFTV------NEFILLNLIEAKDAGGSMTIHTFGAYFG 216

  Fly   193 FASAAMLGPRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTYGVSGAKWQYAARAAVM 257
            .....:|..:....|:........:.:.|.:|...||..|.:|||.|::   ....|:  |||:.
  Rat   217 LTVTWILYRKNLEQSKQRQSSVYHSDLFAMIGTLFLWIYWPSFNSASSF---HGDTQH--RAALN 276

  Fly   258 TMMGSFGGGFTS-SIYSFWRHGGGMDIMDLINGVLGSLVSI-TAGCFLYRAWEALVIGAIGSL-- 318
            |.:.......|: ::.|.....|.:|::.:.|..|...|.: ||...:...:.||::|....:  
  Rat   277 TYLSLAASVLTTVAVSSVIHKKGKLDMVHIQNATLAGGVGVGTAAEMMLTPYGALIVGFFCGILS 341

  Fly   319 ---FCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGL---FKGGG 377
               |..|:..|..|:.:.|..|...:||:.||.|.|...:.|....|  ...|..|:   |..||
  Rat   342 TLGFAYLSPFLESRLRIQDTCGIHNLHGIPGIIGGIVGAVTAAYSSP--DVYGEPGIVHSFGFGG 404

  Fly   378 W------------YLLGIQTLSALCLACWGVCSTFLL 402
            :            .:.|:....|:.|. .|:...|:|
  Rat   405 YKADWTKRMQGRSQIFGLLLSLAMALV-GGIIVGFIL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 94/420 (22%)
RhcgXP_038961559.1 Ammonium_transp 84..459 CDD:413553 86/382 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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