DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and amt-1

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_508784.1 Gene:amt-1 / 180729 WormBaseID:WBGene00000133 Length:534 Species:Caenorhabditis elegans


Alignment Length:501 Identity:153/501 - (30%)
Similarity:243/501 - (48%) Gaps:63/501 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GLYDLSVEDTN--WVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGY 81
            |.|    |:.|  ::.:.:.|||.||.||..||:|.|..||..||::||::|..:....||..|:
 Worm    24 GFY----ENVNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDSCICIIGYWAIGW 84

  Fly    82 GMSFG-RGPLSNPFIAIGDFLL----DPPVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCN 141
            .:::| .|...|.|:....|.|    |.|           .|.||..|:.||.||||||:||||.
 Worm    85 ALAYGDSGEGVNLFVGHSQFFLSGFSDYP-----------RFFFQYVFSATAATIVSGAVAERCE 138

  Fly   142 FKAYCLF-SFLNTAVYCIPAGWVWGEHGFLNK---LGAV-----DIAGSGPVHLIGGASAFASAA 197
            |..|..: :.::|.:|.:...|.|.|:|::.|   .|.:     |.||||.|||.||:.:|.:|.
 Worm   139 FITYVTYCTVISTFIYPVLTHWGWTENGWMAKGITSGIIDTKYDDFAGSGLVHLCGGSISFLAAW 203

  Fly   198 MLGPRLGRYSEGYDPLP---LGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-KWQYAARAAVM 257
            ::|||:|::.:..|...   ||:.|. ..:|.|:|.:|:||||.||...:|.| .....|.|.:.
 Worm   204 IMGPRIGKFPDDEDDESDEILGHSVPFTALGGFILMFGFLAFNGGSVASISHAGDGHTVALAMIN 268

  Fly   258 TMMGSFGGGFTSSIY---SFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRAWEALVIGAIGSLF 319
            |::   .|.|.:.||   .:::| |...::..||..|..:|:..|||.....|..:.:|....|.
 Worm   269 TIL---SGAFAALIYLGVHYYQH-GKWTLLLTINACLSGMVAACAGCNKMEPWACIWVGLGAGLI 329

  Fly   320 CVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGLFKGGGWYL---- 380
            .:....|..|:.:|||:.|.|||...|.||:::..:.:...:.....:..||. |..|.:|    
 Worm   330 YLAFSKLMIRLKIDDPLDAFAVHAGGGFWGLMSSSIISHGGVAYALADAVSGA-KNSGDHLTQAF 393

  Fly   381 --LGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELLGADLTEH--------RIRHSQI 435
              ||.|.:.||.:..|.:.....:.:::.|...:|:....|:.|.|:.:|        ...|...
 Worm   394 AQLGWQMICALAIIAWSLGVMLPIFWILKKTGKLRVSEEVEINGLDVFKHGEMAYPLRAYGHGWH 458

  Fly   436 GLSRA--ISALAPIKVDLKDIAGIQPIGINPGHERSIDQLRAAEDK 479
            ...||  |.|.: .|:.:.:....:.:.|:|  |.||:||.:..|:
 Worm   459 DFERANKIQAFS-AKITVGEGKNTRIMKIHP--EMSIEQLASVYDR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 134/425 (32%)
amt-1NP_508784.1 amt 32..448 CDD:273292 135/431 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276521at33208
OrthoFinder 1 1.000 - - FOG0001736
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100186
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.680

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