DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amt and rhag

DIOPT Version :9

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_002933645.2 Gene:rhag / 100495681 XenbaseID:XB-GENE-983543 Length:431 Species:Xenopus tropicalis


Alignment Length:429 Identity:102/429 - (23%)
Similarity:165/429 - (38%) Gaps:112/429 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NNGTVGAPRNHSNYVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLES-----GCVSIKNEVNI 61
            ||.|.|    :|.::  .||.| .:|.:      .:||   .|||.|.:     |..|:      
 Frog    42 NNSTSG----YSQFL--SLYPL-FQDVH------VMIF---VGFGFLMTFLKRYGFSSV------ 84

  Fly    62 MMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFIAIGDF--LLDPPVGDALMGQIFAAFLFQLSF 124
                       |....:...|:.:|        |.:..|  |.|..:...::..|.|.|      
 Frog    85 -----------GINMLIAALGLQWG--------ILMQGFWHLHDGKIEVDILKMINADF------ 124

  Fly   125 ATTATTIVS-GAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEH--GFLNKLGAVDIAGSGPVHL 186
             :|||.::| ||:..:.:.......:.:..||:..      .||  |:|.   |.||..|..:|.
 Frog   125 -STATVLISFGAVLGKTSPVQMLFMAIIEIAVFAC------NEHLAGYLQ---ASDIGASMTIHT 179

  Fly   187 IGGASAFASAAML-GPRL--GRYSEG--YDPLPLGNPVNACMGLFVLWWGWLAFNSG-STYGVSG 245
            .|.....|:|.:| .|.|  |..:||  |.     :.:.|.:|...||..|.:|||. :.:|::.
 Frog   180 FGAYFGLAAAVVLYRPSLKNGHDNEGSVYH-----SDLFAMIGTLFLWMFWPSFNSAIADHGINQ 239

  Fly   246 ----AKWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVL------GSLVSITAG 300
                ....::..|:|:|         ..::.|...|.|.:|::.:.|..|      |:...:..|
 Frog   240 QMAIINTYFSLAASVLT---------AYAVSSLVEHKGKLDMVHIQNATLAGGVAVGTCADMNIG 295

  Fly   301 CF--LYRAWEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPL 363
            .|  :...:.|.:|..||  |..|...|..::.:.|..|...:||:.||.|.:| |:.|   ..:
 Frog   296 PFGAMIIGFTAGIISTIG--FKYLTPFLSAKLHIQDTCGVHNLHGLPGILGGLA-GIVA---AAI 354

  Fly   364 DTTNGRSGLFKGGGW-YLLGIQTLSA------LCLACWG 395
            ....|.|.:.:|... ..|||..:..      |.|..||
 Frog   355 GAKEGCSPVMQGAALAATLGISVVGGTLTGFILKLPFWG 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 Ammonium_transp 30..428 CDD:275788 93/401 (23%)
rhagXP_002933645.2 Ammonium_transp 54..406 CDD:383203 97/411 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D910733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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