DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and SSB2

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_014190.1 Gene:SSB2 / 855512 SGDID:S000005153 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:606 Identity:367/606 - (60%)
Similarity:460/606 - (75%) Gaps:8/606 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDA 70
            |:|||||||||||..:: ..||||||:||||.|||:||||..|||||||||||.|:||..|:|||
Yeast     9 AIGIDLGTTYSCVATYE-SSVEIIANEQGNRVTPSFVAFTPQERLIGDAAKNQAALNPRNTVFDA 72

  Fly    71 KRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYL 135
            ||||||:|||.:||.|||.|||:|:..||.|.|||.|.:|.|||.|:|||:||||||||.|||.:
Yeast    73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKI 137

  Fly   136 GKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDK-KAVGERNVLIFD 199
            ||.|..|||||||||||:|||||||||.|:||||||||||||||||||||.. |:..||:|||||
Yeast   138 GKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFD 202

  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264
            |||||||||:|.|..|::.||||:|:|||||:|||..|:.||..|||:|...|::.:.|||||||
Yeast   203 LGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLR 267

  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKS 329
            ||.|||||||||.||.::|:||||:|.||.:|:||||||:|||.||:||::|||:.|:|||:.||
Yeast   268 TAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKS 332

  Fly   330 VIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDK-SQEVQDLLL 393
            .|.::|||||||||||||:||.|.|:||:|.||||||||||||||||.|||.|.. |.|.:||||
Yeast   333 QIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLL 397

  Fly   394 LDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
            |||.|||||:...|.:..:::.||||:||.:.:||||.||||..|...||:|||...|:|.|||:
Yeast   398 LDVAPLSLGVGMQGDIFGIVVPRNTTVPTIKRRTFTTVSDNQTTVQFPVYQGERVNCKENTLLGE 462

  Fly   459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAE 523
            |:|..||..|.|.|.:|..|::||||||.|||:|:||.|.:.|||:|..||||.|:||:|||:||
Yeast   463 FDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQAE 527

  Fly   524 KYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLAD 588
            :::..||...:...|:..||||..:::.|:.:..|.:|:....::.|....::.   |.|.|:.|
Yeast   528 EFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDA---LAALQIED 589

  Fly   589 KEEYEHRQKELEGVCNPIITK 609
            ....|.|:.|: |: ..::||
Yeast   590 PSADELRKAEV-GL-KRVVTK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 367/606 (61%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 266/375 (71%)
SSB2NP_014190.1 PTZ00009 6..575 CDD:240227 356/566 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341905
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.600

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