DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and SSB2

DIOPT Version :10

Sequence 1:NP_524356.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_014190.1 Gene:SSB2 / 855512 SGDID:S000005153 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:606 Identity:367/606 - (60%)
Similarity:460/606 - (75%) Gaps:8/606 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDA 70
            |:|||||||||||..:: ..||||||:||||.|||:||||..|||||||||||.|:||..|:|||
Yeast     9 AIGIDLGTTYSCVATYE-SSVEIIANEQGNRVTPSFVAFTPQERLIGDAAKNQAALNPRNTVFDA 72

  Fly    71 KRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYL 135
            ||||||:|||.:||.|||.|||:|:..||.|.|||.|.:|.|||.|:|||:||||||||.|||.:
Yeast    73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKI 137

  Fly   136 GKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDK-KAVGERNVLIFD 199
            ||.|..|||||||||||:|||||||||.|:||||||||||||||||||||.. |:..||:|||||
Yeast   138 GKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFD 202

  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264
            |||||||||:|.|..|::.||||:|:|||||:|||..|:.||..|||:|...|::.:.|||||||
Yeast   203 LGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLR 267

  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKS 329
            ||.|||||||||.||.::|:||||:|.||.:|:||||||:|||.||:||::|||:.|:|||:.||
Yeast   268 TAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKS 332

  Fly   330 VIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDK-SQEVQDLLL 393
            .|.::|||||||||||||:||.|.|:||:|.||||||||||||||||.|||.|.. |.|.:||||
Yeast   333 QIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLL 397

  Fly   394 LDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
            |||.|||||:...|.:..:::.||||:||.:.:||||.||||..|...||:|||...|:|.|||:
Yeast   398 LDVAPLSLGVGMQGDIFGIVVPRNTTVPTIKRRTFTTVSDNQTTVQFPVYQGERVNCKENTLLGE 462

  Fly   459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAE 523
            |:|..||..|.|.|.:|..|::||||||.|||:|:||.|.:.|||:|..||||.|:||:|||:||
Yeast   463 FDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQAE 527

  Fly   524 KYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLAD 588
            :::..||...:...|:..||||..:::.|:.:..|.:|:....::.|....::.   |.|.|:.|
Yeast   528 EFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDA---LAALQIED 589

  Fly   589 KEEYEHRQKELEGVCNPIITK 609
            ....|.|:.|: |: ..::||
Yeast   590 PSADELRKAEV-GL-KRVVTK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_524356.1 PTZ00009 1..612 CDD:240227 367/606 (61%)
SSB2NP_014190.1 PTZ00009 6..575 CDD:240227 356/566 (63%)

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