DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and SSC1

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_012579.1 Gene:SSC1 / 853503 SGDID:S000003806 Length:654 Species:Saccharomyces cerevisiae


Alignment Length:618 Identity:314/618 - (50%)
Similarity:428/618 - (69%) Gaps:29/618 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTQTIFD 69
            :|||||||.|.|.:.: ||| :||.|.:|:|||||.|||| :.|||:|..||.|..:||..|:|.
Yeast    33 IGIDLGTTNSAVAIME-GKVPKIIENAEGSRTTPSVVAFTKEGERLVGIPAKRQAVVNPENTLFA 96

  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVS-ADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEA 133
            .||||||:|:||.||.|:|..|:::|. ::|...:|.    ..:|:.|.:|...||.||||||||
Yeast    97 TKRLIGRRFEDAEVQRDIKQVPYKIVKHSNGDAWVEA----RGQTYSPAQIGGFVLNKMKETAEA 157

  Fly   134 YLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIF 198
            ||||.|.|||:||||||||||||||||||.|.||||||::|||||||:||||:|.  ..:.|.:|
Yeast   158 YLGKPVKNAVVTVPAYFNDSQRQATKDAGQIVGLNVLRVVNEPTAAALAYGLEKS--DSKVVAVF 220

  Fly   199 DLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRL 263
            ||||||||:|||.||:|:||||||.|||||||||||..|:...|..||.:...||..::.|::|:
Yeast   221 DLGGGTFDISILDIDNGVFEVKSTNGDTHLGGEDFDIYLLREIVSRFKTETGIDLENDRMAIQRI 285

  Fly   264 RTACERAKRTLSSSTQASIEIDSLFEGTD------FYTSITRARFEELNADLFRSTMDPVEKALR 322
            |.|.|:||..|||:  .|.||:..|...|      .....:||:||.|.|.|.:.|:|||:|||:
Yeast   286 REAAEKAKIELSST--VSTEINLPFITADASGPKHINMKFSRAQFETLTAPLVKRTVDPVKKALK 348

  Fly   323 DAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQE 387
            ||.|..|.|.:::||||.:|:|||...::.|| ||:.:|::|||||||.|||||.|:|.|    |
Yeast   349 DAGLSTSDISEVLLVGGMSRMPKVVETVKSLF-GKDPSKAVNPDEAVAIGAAVQGAVLSG----E 408

  Fly   388 VQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
            |.|:||||||||||||||.|||.:.||.||||||||::|.|:|.:..|..|.|:|::|||.:.:|
Yeast   409 VTDVLLLDVTPLSLGIETLGGVFTRLIPRNTTIPTKKSQIFSTAAAGQTSVEIRVFQGERELVRD 473

  Fly   453 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIER 517
            |.|:|.|.|:||||||:|||||||||||||:||:||:|.:::|||::.||:....| ||:.:||:
Yeast   474 NKLIGNFTLAGIPPAPKGVPQIEVTFDIDADGIINVSARDKATNKDSSITVAGSSG-LSENEIEQ 537

  Fly   518 MVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDK---CNETIK 579
            |||:|||::::||.:|:.|...|..:....:.:.:|.|  .:.|:..::...:.|:   ..|.:.
Yeast   538 MVNDAEKFKSQDEARKQAIETANKADQLANDTENSLKE--FEGKVDKAEAQKVRDQITSLKELVA 600

  Fly   580 WLDANQLADKEEYEHRQKELEGVCNPIITKLYQ 612
            .:...:..:.||.:.:.:||:.....:..:||:
Yeast   601 RVQGGEEVNAEELKTKTEELQTSSMKLFEQLYK 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 313/616 (51%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 210/382 (55%)
SSC1NP_012579.1 dnaK 30..633 CDD:234715 313/616 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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