DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and SSQ1

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_013473.1 Gene:SSQ1 / 851084 SGDID:S000004361 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:649 Identity:275/649 - (42%)
Similarity:397/649 - (61%) Gaps:72/649 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHG----KVEIIANDQGNRTTPSYVAF---------TDTERLIGDAAKNQ 58
            :|||||||.|.|...:..    ...||.||:|.|||||.|||         ...:.|:|.|||.|
Yeast    31 IGIDLGTTNSAVAYIRDSNDKKSATIIENDEGQRTTPSIVAFDVKSSPQNKDQMKTLVGMAAKRQ 95

  Fly    59 VAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFF--PEEISS 121
            .|:|...|.|..||||||.|:|..||.||...|:::|..:...:   .|........  |.:|:|
Yeast    96 NAINSENTFFATKRLIGRAFNDKEVQRDMAVMPYKIVKCESNGQ---AYLSTSNGLIQSPSQIAS 157

  Fly   122 MVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLD 186
            ::|..:|:|:|.|||:.|..|||||||||||||||||||||.:|||||||:||||||||:::|:|
Yeast   158 ILLKYLKQTSEEYLGEKVNLAVITVPAYFNDSQRQATKDAGKLAGLNVLRVINEPTAAALSFGID 222

  Fly   187 KKAVGERN---VLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRK 248
            .|    ||   :.::||||||||:|||.|:||:|||::|.||||||||||||.:|.:.:..|..:
Yeast   223 DK----RNNGLIAVYDLGGGTFDISILDIEDGVFEVRATNGDTHLGGEDFDNVIVNYIIDTFIHE 283

  Fly   249 H----KKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADL 309
            :    ::::|.|:..::||:...||||..||...:..||:..:::.......:|....:.:...|
Yeast   284 NPEITREEITKNRETMQRLKDVSERAKIDLSHVKKTFIELPFVYKSKHLRVPMTEEELDNMTLSL 348

  Fly   310 FRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAA 374
            ...|:.||::||:||.::...|.:::||||.||:||::.:::||| ||..|.|:||||.||.|||
Yeast   349 INRTIPPVKQALKDADIEPEDIDEVILVGGMTRMPKIRSVVKDLF-GKSPNSSVNPDETVALGAA 412

  Fly   375 VQAAILHGDKSQEVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVL 439
            :|..||.|    |::::||||||||:|||||.||..|.||.||||:|.|:|:.|:|..|.|.||.
Yeast   413 IQGGILSG----EIKNVLLLDVTPLTLGIETFGGAFSPLIPRNTTVPVKKTEIFSTGVDGQAGVD 473

  Fly   440 IQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITIT 504
            |:|::|||.:.::|.|:|..:|:||.|.|:|:|||.|||||||:||:||:|.|:|:.|:..||:.
Yeast   474 IKVFQGERGLVRNNKLIGDLKLTGITPLPKGIPQIYVTFDIDADGIINVSAAEKSSGKQQSITVI 538

  Fly   505 NDKGRLSKEDIERMVNEAEKYRNEDE--KQKETIAAKNGLESYCFNMKATLDEDNL-----KTKI 562
            .:.| ||:|:|.:::.||...|.:|.  :|:..:.:|..:        ...|.:||     |...
Yeast   539 PNSG-LSEEEIAKLIEEANANRAQDNLIRQRLELISKADI--------MISDTENLFKRYEKLIS 594

  Fly   563 SDSDRTTILD------------KCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQGA 614
            |:.:.:.|::            |.||....:|.|.:....:      .|:|..    .||:|.|
Yeast   595 SEKEYSNIVEDIKALRQAIKNFKANENDMSIDVNGIKKATD------ALQGRA----LKLFQSA 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 273/645 (42%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 179/395 (45%)
SSQ1NP_013473.1 dnaK 29..656 CDD:234715 275/649 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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