DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and BIP1

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_198206.1 Gene:BIP1 / 832950 AraportID:AT5G28540 Length:669 Species:Arabidopsis thaliana


Alignment Length:623 Identity:408/623 - (65%)
Similarity:502/623 - (80%) Gaps:7/623 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAK 71
            :|||||||||||||:::|.|||||||||||.|||:|.|||:|||||:|||||.|:||.:|:||.|
plant    38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVK 102

  Fly    72 RLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKD-EKKTFFPEEISSMVLTKMKETAEAYL 135
            |||||||:|..||.|.|..|:::|:.||||.|:|..|| |.|.|.|||||:|:||||||||||||
plant   103 RLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYL 167

  Fly   136 GKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDL 200
            ||.:.:||:||||||||:|||||||||.||||||.||||||||||||||||||. ||:|:|:|||
plant   168 GKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDL 231

  Fly   201 GGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLRT 265
            ||||||||:|:||:|:|||.||.|||||||||||:|::.:|::..|:||:||::.:.:||.:||.
plant   232 GGGTFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRR 296

  Fly   266 ACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSV 330
            .||||||.|||..|..:||:|||:|.||...:|||||||||.||||.||.||:||:.||.|.||.
plant   297 ECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQ 361

  Fly   331 IHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLD 395
            |.:||||||||||||||:||:|.|.|||.||.:|||||||||||||..||.|:...|.:|:||||
plant   362 IDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLD 426

  Fly   396 VTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE 460
            |.||:|||||.||||:.||.|||.||||::|.||||.|.|..|.|||:||||::|||..|||||:
plant   427 VAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFD 491

  Fly   461 LSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAEKY 525
            |:||||||||.|||||||::||||||||.|.::::.|..||||||:|||||:|:|:|||.|||::
plant   492 LNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEF 556

  Fly   526 RNEDEKQKETIAAKNGLESYCFNMKATL-DEDNLKTKISDSDRTTILDKCNETIKWLDANQLADK 589
            ..||:|.||.|.|:|.||:|.:|||..: |:|.|..|:...::..|.....|.::|||.||.::|
plant   557 AEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEK 621

  Fly   590 EEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGG 627
            |||:.:.||:|.|||||||.:||.:    ||.|||.||
plant   622 EEYDEKLKEVEAVCNPIITAVYQRS----GGAPGGAGG 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 399/606 (66%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 263/374 (70%)
BIP1NP_198206.1 PTZ00009 35..644 CDD:240227 399/606 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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