DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and cpHsc70-1

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_194159.1 Gene:cpHsc70-1 / 828531 AraportID:AT4G24280 Length:718 Species:Arabidopsis thaliana


Alignment Length:657 Identity:311/657 - (47%)
Similarity:410/657 - (62%) Gaps:36/657 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTQTIFDA 70
            ||||||||.|.|...:.||..|:.|.:|.|||||.||:|.: :||:|..||.|..:||..|.|..
plant    81 VGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSV 145

  Fly    71 KRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYL 135
            ||.||||.::  |..:.|...:.|| .|....:::......|.|..||||:.||.|:.:.|..:|
plant   146 KRFIGRKMNE--VDEESKQVSYRVV-RDENNNVKLECPAINKQFAAEEISAQVLRKLVDDASRFL 207

  Fly   136 GKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDL 200
            ...||.||||||||||||||.||||||.||||.|||||||||||::|||.|:||  ...:|:|||
plant   208 NDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDRKA--NETILVFDL 270

  Fly   201 GGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLRT 265
            ||||||||:|.:.||:|||.||:|||||||:|||.|:|.....|||:....||..:|:||:||..
plant   271 GGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAAEFKKDEGIDLLKDKQALQRLTE 335

  Fly   266 ACERAKRTLSSSTQASIEIDSLFEGTD----FYTSITRARFEELNADLFRSTMDPVEKALRDAKL 326
            |.|:||..|||.||.::.:..:....|    ..|::|||:||||.:||......|||.:||||||
plant   336 AAEKAKIELSSLTQTNMSLPFITATADGPKHIETTLTRAKFEELCSDLLDRVRTPVENSLRDAKL 400

  Fly   327 DKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDL 391
            ....|.:::|||||||||.||.|::.: .|||.|.::||||.||.||||||.:|.||    |.|:
plant   401 SFKDIDEVILVGGSTRIPAVQELVRKV-TGKEPNVTVNPDEVVALGAAVQAGVLAGD----VSDI 460

  Fly   392 LLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLL 456
            :||||||||:|:||.||||:.:|.||||:||.:::.|:|.:|.|..|.|.|.:|||...:||..|
plant   461 VLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSL 525

  Fly   457 GKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNE 521
            |.|.|.||||||||||||||.|||||||||:|:|:::.|.|:..||||. ...|.|:::::||.|
plant   526 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEVDQMVQE 589

  Fly   522 AEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQL 586
            ||::..:|:::::.|..||..:|..:..:..|.|  |..||....:..:..|..|         |
plant   590 AERFAKDDKEKRDAIDTKNQADSVVYQTEKQLKE--LGEKIPGEVKEKVEAKLQE---------L 643

  Fly   587 ADKEEYEHRQ--KELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAG-----AGGAG 644
            .||......|  |:.....|..:.::.|.....||.  ||||..|...|...::|     .||.|
plant   644 KDKIGSGSTQEIKDAMAALNQEVMQIGQSLYNQPGA--GGPGAGPSPGGEGASSGDSSSSKGGDG 706

  Fly   645 PTIEEVD 651
            ..:.:.|
plant   707 DDVIDAD 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 297/611 (49%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 198/378 (52%)
cpHsc70-1NP_194159.1 PLN03184 40..716 CDD:215618 311/657 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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