DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa12b

DIOPT Version :10

Sequence 1:NP_524356.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001036151.1 Gene:hspa12b / 735291 ZFINID:ZDB-GENE-070226-1 Length:691 Species:Danio rerio


Alignment Length:648 Identity:133/648 - (20%)
Similarity:230/648 - (35%) Gaps:206/648 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTT---YSCVGVFQHGKVEIIANDQG------NRTTPSYVAFTDTERL--IGDAAKNQV- 59
            |.||.|||   |:...:.....:.::...:|      |:.:|:.:..|...|.  .|.||::.. 
Zfish    63 VAIDFGTTSSGYAFSFIEDPETIHMMRRWEGGDPGVANQKSPTCLLLTPDLRFHSFGFAARDSYH 127

  Fly    60 AMNPTQT----IFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEIS 120
            .::|.:.    .||..::......|..:::::     |.||......|||.  .....||.|.  
Zfish   128 DLDPEEARHWLYFDKFKMKIHSTSDLTMETEL-----ESVSGRRVQAIEVF--AHALRFFREH-- 183

  Fly   121 SMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGL------NVLRIINEPTAA 179
              .|.::|:.:.:.|.......||||||.:....:|..::|..:|||      ..|.|..||.||
Zfish   184 --ALKEVKDQSSSVLEGNEVRWVITVPAVWRQPAKQFMREAAYLAGLVPPDSPEQLLIALEPEAA 246

  Fly   180 AI--------------------AYGLD------------------------------------KK 188
            :|                    .:.:|                                    :.
Zfish   247 SIYCRKLRLHQVTDLSQRPVTNGFDIDGSRPFDSSFRQAREQLRRARHSRTFLVESGTGELWSEM 311

  Fly   189 AVGERNVLIFDLGGGTFDVSILSID--DGIFE--VKSTAGDTHLGGED--FDNRLV----THFVQ 243
            ..|:| .::.|.||||.|:::..|:  .|..:  .|::.|.....|.|  |:..|.    |.|:.
Zfish   312 QTGDR-YIVADCGGGTVDLTVHQIEQPQGTLKELYKASGGPYGAVGVDLAFETMLCQIFGTDFID 375

  Fly   244 EFKRKHKK---DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFY---------TS 296
            .||.|...   |||          .|.|..|||.:.....::.|...|...|||         |:
Zfish   376 SFKAKRPAAWVDLT----------IAFEARKRTAAPGRANTLNISLPFSFIDFYKQHRGQSVETA 430

  Fly   297 ITRARFE--------------ELNADLFRSTMDPVEKALRDAKLDKSV--IHDIVLVGGSTRIPK 345
            :.::...              |...:||:.|::.:.|.:.:....:.|  :..:.||||....|.
Zfish   431 LRKSNMNFIKWSSQGMLRLSTEATNELFQPTINNIIKHIENVMQKEEVKGVRFLFLVGGFAESPM 495

  Fly   346 VQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVT-------PLSLGI 403
            :||.:|:.. |:.....|..|..:   ..::.|:|.|           ||.|       ||:.|:
Zfish   496 LQRAIQNTL-GRNCRIIIPHDVGL---TILKGAVLFG-----------LDPTVVRVRRCPLTYGV 545

  Fly   404 ETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG--------ERAMTKDNNL-LGKF 459
                ||::..::                 ...|...:.:.:|        :|.::.|.:: ||:.
Zfish   546 ----GVLNRFVE-----------------GRHPHDKLLIKDGREWCTDILDRFVSVDQSVALGEV 589

  Fly   460 ELSGIPPAPRGVPQI----------EVTFDIDAN----GILNVTALERSTNKENKITITNDKG 508
            ......||..|..:|          ::|:..|..    |.:.:..||  :.:.:..|..||||
Zfish   590 VRRSYTPARMGQRKIIINIYCSDTDDITYITDPGVRKCGAITLDLLE--SGEASASTGDNDKG 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_524356.1 PTZ00009 1..612 CDD:240227 133/648 (21%)
hspa12bNP_001036151.1 ASKHA_NBD_HSP70_HSPA12B 61..528 CDD:466842 104/490 (21%)

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