DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and Hspa12a

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_006527440.1 Gene:Hspa12a / 73442 MGIID:1920692 Length:695 Species:Mus musculus


Alignment Length:669 Identity:149/669 - (22%)
Similarity:246/669 - (36%) Gaps:229/669 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYS-----------CVGVFQHGKVEIIANDQG--NRTTPSYVAFTDTERL--IGDAAK 56
            |.||.|||.|           |:.|.:..:    ..|.|  |:.||:.:..|...:.  .|.||:
Mouse    79 VAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKFHSFGYAAR 139

  Fly    57 N-QVAMNPTQTIFDAKR-LIGRKF-------DDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKK 112
            : ...::|:    :||: |...||       .|..:.:|:       .:|:|| |::..      
Mouse   140 DFYHDLDPS----EAKQWLYLEKFKMKLHTTGDLTMDTDL-------TAANGK-KVKAL------ 186

  Fly   113 TFFPEEISSMVLTKMKETAEAYL----GKTVTNA----VITVPAYFNDSQRQATKDAGTIAGL-- 167
                 ||.:..|...||.|...|    |....|:    ||||||.:....:|..::|...|||  
Mouse   187 -----EIFAYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLAS 246

  Fly   168 ----NVLRIINEPTAAAI---------AYGLDKKAV----------------------------- 190
                ..|.|..||.||:|         ...|..|||                             
Mouse   247 PENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRT 311

  Fly   191 ----------------GERNVLIFDLGGGTFDVSI--LSIDDGIFE--VKSTAGDTHLGGEDFD- 234
                            |::.|:: |.||||.|:::  :.:.:|..:  .|:|.|.....|.|:: 
Mouse   312 FLVENVIGEIWSELEEGDKYVVV-DSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEF 375

  Fly   235 NRLV-----THFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFY 294
            .:|:     ..|:::||.|       ...|...|..|.|..||..:......:.|...|...|:|
Mouse   376 EKLLCKIFGEDFIEQFKIK-------RPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYY 433

  Fly   295 ------------------------TSITRARFEELNADLFRSTMDPVEKALRD--AKLDKSVIHD 333
                                    ..:.|...:.:|| ||:.|:|.:.:.|||  .|.:.|.:..
Mouse   434 KKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNA-LFKPTIDSIIEHLRDLFQKPEVSTVKF 497

  Fly   334 IVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAV-QAAILHGDKSQEVQDLLLLDV- 396
            :.||||....|.:|:.:|..|..|  .:.|.|.:.   |..: :.|:|.|      .|..::.| 
Mouse   498 LFLVGGFAEAPLLQQAVQTAFGDK--CRIIIPQDV---GLTILKGAVLFG------LDPAVIKVR 551

  Fly   397 -TPLSLGIETAGGVMS-----------VLIKRNTT---------IPTKQT--------QTFTTYS 432
             :||:.|:    ||::           :|:|..|.         |...|:        :::|...
Mouse   552 RSPLTYGV----GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAK 612

  Fly   433 DNQPGVLIQVYEGER---------AMTKDNNLLGKFELSG----IPPAPRGVPQIEVTFDIDANG 484
            .:|..::|.:|..|.         .:.|...|  :.:|:|    ..||.|.:..|....|.:   
Mouse   613 PSQLVIIINIYSSEHDNVSFITDPGVKKCGTL--RLDLTGSGGTAVPARREIQTIMQFGDTE--- 672

  Fly   485 ILNVTALERSTNKENKITI 503
             :..||::.:|:|..|:.|
Mouse   673 -IKATAVDITTSKSVKVGI 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 149/669 (22%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 115/502 (23%)
Hspa12aXP_006527440.1 HSPA12A_like_NBD 77..543 CDD:212685 117/510 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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