DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa13

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001082948.1 Gene:hspa13 / 560481 ZFINID:ZDB-GENE-070410-58 Length:438 Species:Danio rerio


Alignment Length:396 Identity:168/396 - (42%)
Similarity:236/396 - (59%) Gaps:25/396 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQ 65
            |...:|:|||||:..|||||  .|::|||.:|:|.::.||.|:||.|....|...:....:||..
Zfish    30 KPRVIGLDLGTTFCSVGVFQPGTGEIEIIEDDKGRKSIPSVVSFTLTGVFAGHEGQELSDVNPQN 94

  Fly    66 TIFDAKRLIGRKFDDAAVQSDMKHWPFEVV----SADGKPKIEVTYKDEKKTFFPEEISSMVLTK 126
            ||:||||.||:.||:..::.:...:||:|:    |||.......|:     |..||.|.|.:|.|
Zfish    95 TIYDAKRFIGKIFDEETLEKESARYPFKVIFNNGSADFLVNTNSTF-----TVTPEFIGSRLLLK 154

  Fly   127 MKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVG 191
            |::.||..||..|..|||:|||.|::.||..|..|..:|||:|||:||||||||:||||.|..| 
Zfish   155 MRKMAEKQLGVPVEKAVISVPAEFDERQRNYTIRAANLAGLDVLRVINEPTAAAMAYGLHKAEV- 218

  Fly   192 ERNVLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTN 256
             .|||:.||||||.|||:|:...|:|..::.||:..|||:||..||:.:..:..::::... .|.
Zfish   219 -FNVLVVDLGGGTLDVSLLNKQGGMFLTRAMAGNNQLGGQDFTQRLLQYTTERVRQQYGVP-PTL 281

  Fly   257 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTD----------FYTSITRARFEELNADLFR 311
            |..:..||.|.|.||..|:......:.:....:.|.          |...:||..|||||||||:
Zfish   282 KEDIHLLRQAVEAAKLNLTQEPHVHLRVPLYLQMTGASGAQEEKVLFEEKLTRETFEELNADLFQ 346

  Fly   312 STMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQ 376
            ..:.|:|..|.:..|||..:.:|||||||||||::::|:...| |||.|.|::||.||..|.|:|
Zfish   347 KILAPIETVLVEGHLDKQEVDEIVLVGGSTRIPRIRQLISQYF-GKEPNTSVDPDLAVVTGVAIQ 410

  Fly   377 AAILHG 382
            |.|:.|
Zfish   411 AGIMGG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 168/396 (42%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 166/390 (43%)
hspa13NP_001082948.1 HSPA13-like_NBD 23..430 CDD:212679 168/396 (42%)
PRK13930 32..409 CDD:237564 162/385 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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