DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-4 and Hsp70Bb

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_524927.2 Gene:Hsp70Bb / 48582 FlyBaseID:FBgn0013278 Length:641 Species:Drosophila melanogaster


Alignment Length:650 Identity:484/650 - (74%)
Similarity:555/650 - (85%) Gaps:13/650 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFD 69
            ||:|||||||||||||:|||||||||||||||||||||||||:||||||.|||||||||..|:||
  Fly     2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFD 66

  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAY 134
            ||||||||:||..:..|||||||:|||..|||||.|.||.|.|.|.|||||||||||||||||||
  Fly    67 AKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAY 131

  Fly   135 LGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFD 199
            ||:::|:|||||||||||||||||||||.|||||||||||||||||:||||||...|||||||||
  Fly   132 LGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196

  Fly   200 LGGGTFDVSILSIDDG-IFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRL 263
            |||||||||||:||:| :|||:||||||||||||||||||||..:|||||:||||.:|.||||||
  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRL 261

  Fly   264 RTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDK 328
            |||.|||||||||||:|:||||:||||.||||.::|||||||.|||||:|:.||||||.|||:||
  Fly   262 RTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDK 326

  Fly   329 SVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLL 393
            ..|||||||||||||||||.|||:.|:||.||.|||||||||||||||||||.||:|.::||:||
  Fly   327 GQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLL 391

  Fly   394 LDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
            :||.|||||||||||||:.||:||..||.|||:||:|||||||||.|||||||||||||||.||.
  Fly   392 VDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGT 456

  Fly   459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAE 523
            |:|||||||||||||||||||:||||||||:|.|.||.|...|||.|||||||:.:|:|||||||
  Fly   457 FDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521

  Fly   524 KYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLAD 588
            ||.:||||.::.|.::|.||||.||:|.:: |.....|:.::|:.::||||||||:|||:|..|:
  Fly   522 KYADEDEKHRQRITSRNALESYVFNVKQSV-EQAPAGKLDEADKNSVLDKCNETIRWLDSNTTAE 585

  Fly   589 KEEYEHRQKELEGVCNPIITKLY-QGAGFPPGGMPGGPGGMPGAAGAAGAAGAGG-AGPTIEEVD 651
            |||::|:.:||...|:||:||:: |||     |..||||...|..    |.|.|| :|||:||||
  Fly   586 KEEFDHKMEELTRHCSPIMTKMHQQGA-----GAAGGPGANCGQQ----AGGFGGYSGPTVEEVD 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 464/608 (76%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 310/375 (83%)
Hsp70BbNP_524927.2 PTZ00009 2..641 CDD:240227 482/648 (74%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 310/375 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440301
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 1 1.000 - - mtm9161
orthoMCL 1 0.900 - - OOG6_100083
Panther 1 1.100 - - P PTHR19375
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.740

Return to query results.
Submit another query.