DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and Hsc70Cb

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster


Alignment Length:690 Identity:196/690 - (28%)
Similarity:333/690 - (48%) Gaps:101/690 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAK 71
            :|||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|...|:...|
  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68

  Fly    72 RLIGRKFDDAAVQSDMKHWPFEV-VSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYL 135
            ||:||||:|..||.::...|..| ...||...|:|.|..|.:.|.||::::|:.||:|||:.|.:
  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133

  Fly   136 GKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGE---RNVLI 197
            ...|.:.||..|.:|.:::|:|..||..||||||||::||.||.|:|||..|..:.|   |||:.
  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198

  Fly   198 FDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRR 262
            .|.|..:...|..:...|..::.::..| .:||.|.|..|..:|.:||:.::|.:..||.||..|
  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262

  Fly   263 LRTACERAKRTLS-SSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKL 326
            |.|..|:.|:.:| :||:..:.|:...:..|..:|:.|::.|||.|.:.:......::.|.::||
  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327

  Fly   327 DKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDL 391
            ....||.:.:||||:|||.|::|::.:|| |..:.::|.||||:.|||:|.||:  ..:..|::.
  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRVREF 389

  Fly   392 LLLDVTPLSLGI------ETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVL-IQVYEGERAM 449
            .:.|:...::.:      ..|.|.:.:..:.:.: |..:..|.     |:.|.. :.:..|::..
  Fly   390 GVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHAS-PFSRLLTI-----NRKGPFNVSIVYGQQVP 448

  Fly   450 TKDNNLLGKFELSGIPPAPRGVPQ-IEVTFDIDANGILNVT---------------ALERSTNKE 498
            ..|.. :|.:::..:.|..||..| :::...|:.|||:.::               |.|::.::|
  Fly   449 YPDQT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEE 512

  Fly   499 NKITITNDKGR------------------------------------------------------ 509
            .....||:.|.                                                      
  Fly   513 KPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELP 577

  Fly   510 -------LSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDR 567
                   .|..|:.....:..|....|:|:.|.|.|||.||.:.::|:..|.....:..:.:::|
  Fly   578 LECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAER 642

  Fly   568 TTILDKCNETIKWL-DANQLADKEEYEHRQKELEGVCNPI 606
            ..|:.:.|:...|| :..:..:::.|..|.:.|....:||
  Fly   643 EKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 196/690 (28%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 147/378 (39%)
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 147/380 (39%)
HSP70 3..682 CDD:278441 194/688 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464198
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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