DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa4b

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_956151.1 Gene:hspa4b / 334086 ZFINID:ZDB-GENE-030131-6018 Length:840 Species:Danio rerio


Alignment Length:838 Identity:221/838 - (26%)
Similarity:354/838 - (42%) Gaps:215/838 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAK 71
            ||.|:|.....|.|.:.|.:|.:||:..:|.||:.|:|....|.||.|||:|:..|...|:...|
Zfish     4 VGFDVGFLNCYVAVARAGGIETVANEYSDRCTPACVSFGPRNRSIGAAAKSQMVTNCKNTVHGFK 68

  Fly    72 RLIGRKFDDAAVQS-------DMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKE 129
            |..||.|.|..||:       |:...|      .|...::|.|.:|:|.|..|::::|:|||:||
Zfish    69 RFHGRAFSDPFVQNLKPSLVYDLAQMP------SGTTGLKVMYMEEEKVFSIEQVTAMLLTKLKE 127

  Fly   130 TAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAV---- 190
            |||:.|.|.|.:.||:||.::.|::|::..||..|||||.||::||.||.|:|||:.|:.:    
Zfish   128 TAESALKKPVADCVISVPCFYTDAERRSVIDAAQIAGLNCLRLMNETTAVALAYGIYKQDLPAPE 192

  Fly   191 -GERNVLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLT 254
             ..|||:..|:|...:.||:.:.:.|..::.:||.|..:||:.||.|||.:|.:||..|:|.|..
Zfish   193 EKPRNVVFVDIGHSGYQVSVCAFNKGKLKILATAFDPEMGGKYFDERLVKYFCEEFVVKYKLDAK 257

  Fly   255 TNKRALRRLRTACERAKRTLS-SSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVE 318
            |..|||.||...||:.|:.:| :|:...:.|:......|..:.:.||:|||:.||:......|:.
Zfish   258 TKPRALIRLFQECEKLKKLMSANSSDLPLNIECFMNDVDVSSRLNRAQFEEMCADILARVEPPLR 322

  Fly   319 KALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGD 383
            ..|..|.|.|..||.:.:|||::|:|.::..:...| |||.:.::|.|||||.|.|:|.|||  .
Zfish   323 SLLEQAHLKKDDIHAVEIVGGASRMPAIKERISKFF-GKEPSTTLNADEAVARGCALQCAIL--S 384

  Fly   384 KSQEVQDLLLLDVTPLSLGIE----TAGGVMSV-LIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY 443
            .:.:|::..:.:|.|..:.::    ...||... :..:|...|..:..||..   .:|..|...|
Zfish   385 PAFKVREFSITEVVPFPISLKWNSAAEDGVSDCEVFPKNHAAPFSKVLTFYR---REPFTLDAYY 446

  Fly   444 EGERAMTKDNNLLGKFELSGIPPAPRG-VPQIEVTFDIDANGILNVTA----------------- 490
            ...:.:...:..:|::.:..:.|...| ..:::|...::.:||.:|::                 
Zfish   447 NSPKELPYPDPTIGQYVVQKVVPQASGESSKVKVKVRVNIHGIFSVSSASLVEVQKSEEEEESME 511

  Fly   491 LERSTNKEN-----------KITITNDKGRLSKEDIERMVNEAEKYRNE---------------- 528
            .|:||.|||           |...|..:....|...|.|...||:.:.|                
Zfish   512 TEQSTEKENENKMQVDQEEQKTPETEQENGEKKPGTEEMETSAEEGKQEKKSDQPPQAKKPKVKT 576

  Fly   529 ---------------------------------DEKQKETIAAKNGLESYCFNMKATL------- 553
                                             |:.:||...|||.:|.|.:.|:..|       
Zfish   577 KVLDLPIENNPQWQLANDMLNLFVESEGKMIMQDKLEKERNDAKNYVEEYVYEMRDKLHGIFEKF 641

  Fly   554 ----DEDNLKTKISDSD-----------RTTILDK------------------------------ 573
                |.|.|..|:.|::           :...:||                              
Zfish   642 VTESDRDVLSLKLEDTEVWLYEDGEDQPKQIYIDKLAELKNLGQPIQDRYREFEERPKAFEELGR 706

  Fly   574 ---------------------------------CNETIKWLDA--NQLADKE----------EYE 593
                                             .|:.:.|:::  ||.:.:.          |.:
Zfish   707 QLQQYMKIVEAYKTKEEQYDHLEEAEIQKVDKMVNDVMIWMNSKMNQQSKQSLAIEPVVKTTEIQ 771

  Fly   594 HRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGG----------MPGAAGAAGAAGAG 641
            .:.:||...|||::||.......|....|..|.|          .||....|.|..||
Zfish   772 AKTRELFSTCNPVVTKPKPKVDLPKEENPSEPNGPVNTQENPEAQPGGTEPAAADSAG 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 211/797 (26%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 148/386 (38%)
hspa4bNP_956151.1 HSPA4_NBD 2..384 CDD:212687 149/388 (38%)
HSP70 3..693 CDD:278441 199/700 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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