DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and Hspa1a

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_114177.2 Gene:Hspa1a / 24472 RGDID:1593284 Length:641 Species:Rattus norvegicus


Alignment Length:651 Identity:523/651 - (80%)
Similarity:581/651 - (89%) Gaps:10/651 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQ 65
            |:|..|:|||||||||||||||||||||||||||||||||||||||||||||||||||||:||..
  Rat     1 MAKKTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65

  Fly    66 TIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKET 130
            |:|||||||||||.|..||||||||||:||:...|||::|.||.|.::|:||||||||||||||.
  Rat    66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEI 130

  Fly   131 AEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNV 195
            ||||||..||||||||||||||||||||||||.|||||||||||||||||||||||:...|||||
  Rat   131 AEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNV 195

  Fly   196 LIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRAL 260
            |||||||||||||||:|||||||||:|||||||||||||||||:|||:|||||||||::.||||:
  Rat   196 LIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAV 260

  Fly   261 RRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAK 325
            |||||||||||||||||||||:||||||||.||||||||||||||.:||||.|::||||||||||
  Rat   261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAK 325

  Fly   326 LDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQD 390
            |||:.|||:|||||||||||||:||||.|||::||||||||||||||||||||||.||||:.|||
  Rat   326 LDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQD 390

  Fly   391 LLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
            ||||||.|||||:|||||||:.|||||:||||||||||||||||||||||||||||||||:||||
  Rat   391 LLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNL 455

  Fly   456 LGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVN 520
            ||:||||||||||||||||||||||||||||||||.::||.|.|||||||||||||||:|||||.
  Rat   456 LGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQ 520

  Fly   521 EAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQ 585
            |||:|:.|||.|:|.:||||.||||.||||:.::::.||.|||::|:..:||||.|.|.|||:|.
  Rat   521 EAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNT 585

  Fly   586 LADKEEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEEV 650
            ||:|||:.|:::|||.||||||:.||||||.|      |.||.    ||....|..|:|||||||
  Rat   586 LAEKEEFVHKREELERVCNPIISGLYQGAGAP------GAGGF----GAQAPKGGSGSGPTIEEV 640

  Fly   651 D 651
            |
  Rat   641 D 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 502/610 (82%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 323/374 (86%)
Hspa1aNP_114177.2 PTZ00009 1..641 CDD:240227 521/649 (80%)
Nucleotide-binding domain (NBD). /evidence=ECO:0000250|UniProtKB:P11142 2..386 328/383 (86%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 323/374 (86%)
Substrate-binding domain (SBD). /evidence=ECO:0000250|UniProtKB:P11142 394..509 102/114 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 618..641 13/26 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 1 1.000 - - otm45832
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X148
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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