DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hsp-3

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001370435.1 Gene:hsp-3 / 180880 WormBaseID:WBGene00002007 Length:661 Species:Caenorhabditis elegans


Alignment Length:617 Identity:383/617 - (62%)
Similarity:494/617 - (80%) Gaps:8/617 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPTQTIFD 69
            :|||||||||||||:::|:|||||||||||.|||||||:  ..:||||||||||:.:||..||||
 Worm    36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFD 100

  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAY 134
            |||||||.::|..||:|:|||||:|:....||.:||....:.|.|.|||:|:|||.||||.||:|
 Worm   101 AKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESY 165

  Fly   135 LGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFD 199
            |||.|.|||:||||||||:||||||||||||||||:||||||||||||||||||. ||||:|:||
 Worm   166 LGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKD-GERNILVFD 229

  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264
            |||||||||:|:||:|:|||.:|.|||||||||||.|::.:|::.:|:|..|||..:|||:::||
 Worm   230 LGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLR 294

  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKS 329
            ...|:|||.||:..|..:||:|||:|.||..::|||:|||||.||||:|:.||:|.|.|:.|.|.
 Worm   295 REVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKD 359

  Fly   330 VIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLL 394
            .:|:||||||||||||||:|:::.|||||.::.||||||||||||||..::.|:  ::..:::||
 Worm   360 DVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLL 422

  Fly   395 DVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKF 459
            ||.||::||||.||||:.||.|||.||||::|.|:|.:||||.|.|||:||||.|||||:.||||
 Worm   423 DVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKF 487

  Fly   460 ELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAEK 524
            :|:|:||||||||||||||:||.||||:|||.::.|..:||||||||:.|||.||||||:|:|||
 Worm   488 DLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEK 552

  Fly   525 YRNEDEKQKETIAAKNGLESYCFNMKATL-DEDNLKTKISDSDRTTILDKCNETIKWLDANQLAD 588
            :..:|:|.|:...|:|.||||.:|:|..: |::.|..|:.:.|:.||.:...|.|.||.:|..|.
 Worm   553 FAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEAS 617

  Fly   589 KEEYEHRQKELEGVCNPIITKLYQGAGFPPGG 620
            .||.:.::|:||....||::|||:.||  .||
 Worm   618 AEELKEQKKDLESKVQPIVSKLYKDAG--AGG 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 378/607 (62%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 251/375 (67%)
hsp-3NP_001370435.1 PTZ00009 32..648 CDD:240227 383/617 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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