DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa2

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_004917261.1 Gene:hspa2 / 100496396 XenbaseID:XB-GENE-992125 Length:633 Species:Xenopus tropicalis


Alignment Length:652 Identity:515/652 - (78%)
Similarity:573/652 - (87%) Gaps:23/652 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQT 66
            :.||||||||||||||||||||||||||||:||||||||||||||||||||||||||||:||..|
 Frog     3 ANAPAVGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVALNPANT 67

  Fly    67 IFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETA 131
            ||||||||||:|||..||:|||||||.|||..||||::|.:|.|.|||||||||||||:||||.|
 Frog    68 IFDAKRLIGRRFDDPTVQADMKHWPFTVVSDGGKPKVKVEFKGENKTFFPEEISSMVLSKMKEVA 132

  Fly   132 EAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAV--GERN 194
            |||||..|.||||||||||||||||||||||.|:|:|||||||||||||||||||||..  ||.|
 Frog   133 EAYLGVKVPNAVITVPAYFNDSQRQATKDAGVISGINVLRIINEPTAAAIAYGLDKKGAGHGETN 197

  Fly   195 VLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRA 259
            ||||||||||||||:|:||.||||||||||||||||||||||:|.|||:|||||:|||::.||||
 Frog   198 VLIFDLGGGTFDVSVLTIDGGIFEVKSTAGDTHLGGEDFDNRMVAHFVEEFKRKNKKDISGNKRA 262

  Fly   260 LRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDA 324
            :|||||||||||||||||||||:|||||:||.||||:|||||||||.|||||.|::|||||||||
 Frog   263 VRRLRTACERAKRTLSSSTQASLEIDSLYEGADFYTAITRARFEELCADLFRGTLEPVEKALRDA 327

  Fly   325 KLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQ 389
            ||||:.|.:||||||||||||||:||||.|||:|||||||||||||||||||||||.||||..||
 Frog   328 KLDKAQIREIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDKSHNVQ 392

  Fly   390 DLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
            |||||||.|||||||||||||:.|||||||||:|||||||||||||..||:||||||||||:|||
 Frog   393 DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQSSVLVQVYEGERAMTRDNN 457

  Fly   455 LLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMV 519
            |||||:|:||||||||||||||||||||||||||||.::||.|||||||||||||||||||||||
 Frog   458 LLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKEDIERMV 522

  Fly   520 NEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDAN 584
            |:||||:.|||..::.:|||||||||.:::|.|.:::.||.|:|:.:::.|||||.|.|.||:.|
 Frog   523 NDAEKYKAEDELNRDRVAAKNGLESYAYHIKQTAEDEKLKGKLSEKEKSQILDKCKEVIDWLEKN 587

  Fly   585 QLADKEEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEE 649
            |:|:|:|:||:|||||.||||||||||||         |.|.  ||.||          ||||||
 Frog   588 QMAEKDEFEHKQKELEKVCNPIITKLYQG---------GAPN--PGTAG----------GPTIEE 631

  Fly   650 VD 651
            ||
 Frog   632 VD 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 498/611 (82%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 320/376 (85%)
hspa2XP_004917261.1 PTZ00009 2..633 CDD:240227 513/650 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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