DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa12a

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_002941887.2 Gene:hspa12a / 100489323 XenbaseID:XB-GENE-959285 Length:664 Species:Xenopus tropicalis


Alignment Length:671 Identity:142/671 - (21%)
Similarity:229/671 - (34%) Gaps:240/671 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYS-----------CVGVFQHGKVEIIANDQG--NRTTPSYVAFTDTERLIGDAAKNQ 58
            |.||.|||.|           |:.:.:..:    ..|.|  |:.||:      |..|:.|..   
 Frog    56 VAIDFGTTSSGYAYSFSKEPECIHIMRRWE----GGDPGVSNQKTPT------TMLLMPDRK--- 107

  Fly    59 VAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPF------------------EVVSADGK--PKI 103
                     |.:.....|.|......|:.|||.:                  |:.:|:||  ..:
 Frog   108 ---------FHSFGFAARDFYHDLDPSESKHWLYFEKFKMKLHSSTDLTMETELTAANGKRVKAL 163

  Fly   104 EV-TYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGL 167
            |: .|..:   :|.|:    .|.::.:.|.:.:.......||||||.:....:|..:.|...||:
 Frog   164 EIFAYALQ---YFKEQ----ALKELSDQAGSEMDSAEVRWVITVPAIWKQPAKQFMRQAAYKAGM 221

  Fly   168 ------NVLRIINEPTAAAI---------AYGLDKKAV--------------------------- 190
                  ..|.|..||..|:|         ...|..||.                           
 Frog   222 ATPENPEQLIIALEPEGASIYCRKLRLHQMIDLSSKAAINGISPTDPAKDLARRNRQSRTFLVEN 286

  Fly   191 -----------GERNVLIFDLGGGTFDVSI--LSIDDGIFE--VKSTAGDTHLGGEDFD-NRLV- 238
                       |:|.|:: |.||||.|:::  :.:.:|..:  .|::.|.....|.|:: .:|: 
 Frog   287 VIGELWSELEEGDRYVVV-DCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLC 350

  Fly   239 ----THFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFY----- 294
                ..|:..||.|       ...|...|..|.|..||..:......:.|...|...|:|     
 Frog   351 KIFGDDFIDTFKVK-------RPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRG 408

  Fly   295 -------------------TSITRARFEELNADLFRSTMDPVEKALRD--AKLDKSVIHDIVLVG 338
                               ..:.|...:.:|| ||:.|:||:.:.|.:  .|.:.:.:..:.|||
 Frog   409 HSVEHALRKSNVDFVKWSSQGMLRMNPDAMNA-LFKPTIDPIIQHLTNLFQKPEVAGVKFLFLVG 472

  Fly   339 GSTRIPKVQRLLQDLFNGKELNKSINPD-----------------------EAVAYGAAVQAAIL 380
            |....|.:|:.:|..| |.:....|..|                       ..:.||..|....:
 Frog   473 GFAESPLLQQAVQQAF-GDQCRVIIPHDVGLTILKGAVLFGLDPALIKVRRSPLTYGVGVLNRYV 536

  Fly   381 HGDKSQEVQDLLLLDVT---------------PLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTT 430
            .|....|  .|||.|.|               .::|| ||        :||:.| |.||:|..  
 Frog   537 EGKHPPE--KLLLKDGTRWCTDVFDKFILADQSVALG-ET--------VKRSYT-PAKQSQLI-- 587

  Fly   431 YSDNQPGVLIQVYEGERAMTKDNNLLG----------KFELSGIPPAPRGVP---QIEVTFDIDA 482
                   ::|.:|..|:   .|.|.:.          :.:|:|...||  ||   :|:.......
 Frog   588 -------IIIHIYSSEQ---DDANFITDKGVRKCGTLRLDLTGPESAP--VPSRREIQTIMQFGD 640

  Fly   483 NGILNVTALERSTNKENKITI 503
            ..| ..||::.:|:|..|::|
 Frog   641 TEI-KATAVDVATSKNVKVSI 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 142/671 (21%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 105/519 (20%)
hspa12aXP_002941887.2 HSPA12A_like_NBD 54..513 CDD:212685 102/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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