DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tefu and ATM

DIOPT Version :9

Sequence 1:NP_001036712.1 Gene:tefu / 41839 FlyBaseID:FBgn0045035 Length:2767 Species:Drosophila melanogaster
Sequence 2:NP_001326746.1 Gene:ATM / 823975 AraportID:AT3G48190 Length:3013 Species:Arabidopsis thaliana


Alignment Length:3418 Identity:722/3418 - (21%)
Similarity:1246/3418 - (36%) Gaps:1075/3418 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EIQRILGDLQSGKAASRNKGIQQL------DEKLSSCREDLDKLFLSKTSDISWTTIFEASKEAL 65
            ::..|:..|.|.||.:|..|::.|      :..::.||      |||:.:             |.
plant     6 DVHEIVSKLSSDKAKTREDGVKLLNTWLEGERSITFCR------FLSQNT-------------AK 51

  Fly    66 FKQAGNLEDV-NEKVFKTLAGKNYLYDNVLEKITQFNLEAGSQTSGNGHFLAKTSIFSAFEDGIK 129
            .|    |::: |.:.:.      :|...:|:.::.       :.||:...:.|.:....      
plant    52 LK----LDEIPNAETWP------FLVKLLLQCVSM-------EVSGSKRRMPKPTFAKT------ 93

  Fly   130 MRVVV------KYFGDR--ILSLLEKGIYSSVSYVRDLKIN------EYSRILSYLFELNVDMDE 180
            :||||      |:.|.:  :||:.:    :..::|.|:..|      ||..||.:|.|:     :
plant    94 LRVVVQRTEETKFPGVQFPLLSMAK----TLFTHVHDILSNTPSFQSEYGTILRHLLEI-----K 149

  Fly   181 VLRTRILKCITRTVSLAKDRVQLHVDLVEYLPELSSFALSAFG--ARKTEIVRVYLIFASELAVN 243
            ..|.::.|   ||.|   ..|.|:::..|     :.|.....|  ::|.|..| |::....|..|
plant   150 EYRFQMRK---RTYS---SLVLLYMERAE-----TGFCEKNSGQHSQKEEAFR-YILTLQSLLEN 202

  Fly   244 ----YNHQLNVHMQEILPKLCEYHDEDAFRDD---TRNLFFQCVSKSLHSMYLKMDMCDFNTLGV 301
                :...|.   :||:..|  .|...:.||:   :|.| .:||     :.:|..|..:..:|.:
plant   203 SPGDFPDDLR---EEIVNGL--IHIFSSVRDEGKLSRKL-IECV-----NTFLLKDGPNLGSLSL 256

  Fly   302 PVHEKWPQTLLR---------LKTIVNVEIRKNSWARCKNALLSNNKFSDPFIKMSALAMYIVLW 357
            .:|....|.:.|         ||.|:      .|:.|.:..|..::..|...::.   .:.:|..
plant   257 EIHNAVEQFVFRCWLTTHDKNLKEIL------VSYGRLQLNLTRDSSESSSLVEQ---LLDVVTR 312

  Fly   358 HLETKKADENGE-GDAPKKIPKPADKMETIFSLIDKKENTFNDVWLAIF------TEILQLSSVI 415
            .|:...:..:.. ||..|.     :|:..:.|.    :|:..::...:|      |....||...
plant   313 ELDLGSSSSSASWGDTTKD-----EKLGALSSY----QNSLVELAAHVFYRACVNTSRPSLSEKR 368

  Fly   416 LNVANYQM----ALT--------TVAEIMQMYGNAKNLRNLRLCLAHLLTKEQELLHSKSIREDF 468
            ....:..|    |||        ....:::.|....|:..|......:.|..|.||...|:|..:
plant   369 ARRQHIAMRMVDALTEGKWLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLEDASMRRSY 433

  Fly   469 LGELWSQMANQLISETTTNSEEIKEKQLVLQMLIRHNKLNQKLSSTLLNNIISNEMLKRNECLAT 533
            .|.||:                       |:.|       |.|||.|                 :
plant   434 DGLLWT-----------------------LRSL-------QGLSSGL-----------------S 451

  Fly   534 IREIFIHADKCGQDKASADLEPIIAWAYGSADRFIAAQMIHNIDSIDAQLQADTFAISIINFLDV 598
            :.:|.:...|.....:..|.    .|      :.|.:.:||.:        |...::|:|....:
plant   452 LPDITMDISKSSASSSELDR----GW------QSIWSSLIHGL--------ATFSSMSVIVDAVL 498

  Fly   599 QQLRQISQSEHIVPSTERNLLAYKYNEQLICFDKDYATPFESITHIQSETKNCLIQ---SNYDC- 659
            ..|..|..|.||   |.:.|....::.||             ..||.||.....|.   |...| 
plant   499 VLLGSIISSNHI---TVKILPQEVWDHQL-------------FRHIPSEPALYFIACYFSRMGCQ 547

  Fly   660 --LMRGLNFEIAKENKPAAIIKNLNSLLKLICTM----------ERLLHYKVFDADTYTGC---- 708
              |...|:..              .:||:.:|..          ||::  ::..|..::.|    
plant   548 GNLQDDLHLR--------------RNLLRAVCAPLSWKVRLTLDERMV--QLLPAAAFSLCAGFK 596

  Fly   709 ---PLIK----------------------RIGLYLSHIEF-------QLKANGAEILDKSDLPEI 741
               ||.|                      ..||:...:|.       ..|.:|.::.|...||.:
plant   597 VSLPLPKEHLPTPSQWDVCEQIDDVDRERNFGLFECSVEALTRICSNSSKISGCQVPDVVQLPLV 661

  Fly   742 LR------LEIYVLDVFRTNLVLLDYLERQPIEMLVEFVGAALKLHSMQRERSVDADHGT-ITR- 798
            ||      ::||.|.      ::.:..|:.|:..:  |:|.||..|.|         ||: ||| 
plant   662 LRDPLLHDMDIYFLS------IIPEVKEKGPLSDI--FMGCALLCHFM---------HGSYITRK 709

  Fly   799 ----------LCLNILAGLCAYNSHRDEAFEHIVK------------------------VTMRWH 829
                      .|..:|.||       |.|.|.:.|                        |::|..
plant   710 GKGSSSFFLKACQYLLEGL-------DHAVESVSKSLNDLQRRGSLGFGSDFNEKGSIIVSLRSF 767

  Fly   830 PQDVLIVTKMLCSCQTISEASSSWLVSKLKTL----------FQQH----HQD------------ 868
            .|..:...:   ..|.:..||..:::..|:.|          :.:|    |.|            
plant   768 TQSPVFSNR---RDQNLLGASYDFVIHSLENLLRSFAKVYEEYTEHAWNTHSDTVPSKSLAPDSP 829

  Fly   869 --AELMD-------------------KVVQHMPT--------------------------IFYFV 886
              ..::|                   |.|..:|.                          :.|.:
plant   830 EVGRIVDMDLDLAEDTKERDIIAAGGKAVPGLPVSMGNWKLGMVSLISCFSPVLQFPTWDVLYNL 894

  Fly   887 RHKEN----------HL------------DDMLMALNSLL--RIAIKKSYTSNLTAKIVRCVGLI 927
            ..||:          ||            ||:::.|:.:|  ::.:|::..:.:||..|....|.
plant   895 LEKESDPKVLENILYHLCKLSCLTSIPKVDDLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLS 959

  Fly   928 AQRCPDIYLLENFAVICKSTAKFITMPTLEV------RFATLFTFTILLESNCV----------- 975
            :.|.....:.:|..:..|....|.....|..      .|..|..|..:...||:           
plant   960 SSRRDSSGVEKNCGLSLKEAESFQVFVQLGAMVNKVSEFGLLGWFGRVKLINCICDLVLLNPQTG 1024

  Fly   976 ----------TSDA-----------IGHSRTHWD----FCQELYESIEFKKLTYNNEDAIQNSNA 1015
                      .||:           ||.....||    ..|::..|...|.:|.:.|..:...:.
plant  1025 QTMIERLLLMLSDSDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGIKLVTSSKEKLVTAKDV 1089

  Fly  1016 LIV--------QMLIAIFLRSSFHQE-IALKELLHHCAL--RRLTEREFI--SLQSMSS-CHRQT 1066
            |.|        :.:|...:..::|.| |.|:.:...||:  :...:||.|  :|.::|: .|..:
plant  1090 LAVGPQPRQKMETVIITLMHLAYHSENIELQAVFMMCAVSAKDPCQRELIIAALDNLSAQLHYPS 1154

  Fly  1067 ----VRDLIRPFAAILLHHW-------------SSKRWPISKFPYFLCYSTKSEFRKTHASEIMA 1114
                :.:|:.|    :|.||             |....|.::..||:.:.         :..::.
plant  1155 RFKYLEELLGP----ILFHWIASGVSLAGLIETSQLFIPNAEPKYFIHFC---------SHWLLP 1206

  Fly  1115 YTFLYGKTEDIERCSKSISEELALPILASFLLI----------KNSSCSE--------------- 1154
            ...|:....:::..:|...:.:.:.:..:|:.|          |.|.|.:               
plant  1207 ALLLHEDHTNLDWVAKMAGQPVVVLVKENFVPIFSICMGLHCSKTSECDKGAMVLQNSILYVGET 1271

  Fly  1155 SEGQNFKEHLQLLSENLSYSQLNATDVDLDLDILCYVISMLHDPQEMMRLFGSLAICNRTASWYS 1219
            ||.:..|    |:.:|:             :.|:.:::|                          
plant  1272 SENERDK----LIKQNM-------------VSIVSFILS-------------------------- 1293

  Fly  1220 LSGESLFKCLNFHIDPEMRPSMDSRIQSMTTLQTKHSRVLVDIFGRLKTNCYSASFSSQALHDFF 1284
                    |.:...:|.                       |..|.|     .:.|.:.|.:.|.|
plant  1294 --------CASSSPEPP-----------------------VPTFSR-----DTISLAVQTVVDGF 1322

  Fly  1285 LYCEVADAVYDAARKNETIVTQCSFFVRD-IWFFVVRL------LIHTKFIRVQMAALTFLELLL 1342
            |  |..|  |.   ||..|..:.:.|..| ::.|:..:      ..|.:..|..:|||..|.:||
plant  1323 L--ENTD--YP---KNAAITDRINIFRPDRVFMFITEMHYRMSAACHHRHTRHHLAALEELTILL 1380

  Fly  1343 NKH-------NF------------------------RLDDYQNH--------FGD-IAKLLSNFQ 1367
            ...       |:                        .||.::::        .|| :..|:|...
plant  1381 GHRALVPSSLNYIFNLVGQFIGYPSLQDQCCSIASCLLDLFKSNPAKEIVSVLGDQLQFLVSKLV 1445

  Fly  1368 LCCEAKEVREK--------TMSIVMYILESKKGHINLN-SFLEETTDCEFLKPLRED----CKSS 1419
            .||...|...|        .::::..::.|....:|.: ..||...|.::.:.:||.    |::.
plant  1446 TCCIDAEADTKISGAKSSQLVNLLHKLVVSSDSSLNEDIRDLEPLPDLKYFQVIRESHIRICEAY 1510

  Fly  1420 QPN---IDRADVANYLRSFLLSPTPERLRDLRTYIAEHKDKVQEHEKLLFGVINKLIQMTRDAHN 1481
            .|.   :..:..:|||....||.:.:.|                |.||:...:::     .|.:.
plant  1511 SPRNHLLKCSRRSNYLPPRFLSRSLQAL----------------HNKLIASEVSQ-----EDTNG 1554

  Fly  1482 KTT------------------------SIDSLKC-----LAQIGPLKISTVSYYFQTD------F 1511
            :|.                        ..||::.     |::||.....||.::...:      .
plant  1555 ETAETFWQSDDEIVNAVWTLVRVSASDEADSMRLLVSDFLSRIGIRDPHTVVFHLPGNLVSMHGL 1619

  Fly  1512 EAFEKSNGEPMEAFL--GVVCHSLDTSL-----FQFDPKTHEGLVSVAIQ----VVNSKPGSNIM 1565
            :.|..:.|..:.:..  |:...:|.|.|     :..|....  ::.|..|    :::::.|...:
plant  1620 QGFGHNTGSKVRSLTENGISDETLITLLNFLKKYLLDDSVK--IIDVTSQTLRGILSTERGQQAL 1682

  Fly  1566 ERYK--------------NLRIFADKSTASTFLHSNKQIRRIDWLSI----LKATKSLSYEPWMC 1612
            ..:.              ||.|     .....|.|.||. :.:..|:    :.:|.:.:::.|:|
plant  1683 SSFDSCERALIEVHGRGVNLDI-----VEKILLDSQKQF-KAEKFSLETPEVWSTDNKNFDRWIC 1741

  Fly  1613 -------------------------------AFVSKVFQMCGWLGFD-------KLAATSFAFAK 1639
                                           .|.|.|..:.|.:|.|       ........|..
plant  1742 QLVYCMIALCEDVPIRLCQNIALLKAEISELLFPSVVVSLAGRIGMDINLHDLITSQVKEHIFTD 1806

  Fly  1640 TCLLPFIKLLLENSLEHVESLSQMLDYFFEGFTS--------STAPNSQEIFRNKRAIKKFLHIC 1696
            :..|...|.::.|:|..:.....:....|.|.|.        |||...:::......:.      
plant  1807 SNKLTKSKQVMLNTLNELRMCYVLERSIFSGQTKREKNSRSCSTAAKIRDVESGSNGMA------ 1865

  Fly  1697 EYIRIFNNW--TIPINLSNVVMASNH--CQAYFLSIMYLELWACSES----PKSKADFLDNECFQ 1753
              ..|..||  ...:::..:|:|.:.  |.||..:.||:|.| |.|.    .....||..::...
plant  1866 --ASITTNWEKVYWLSIDYLVVAGSAVVCGAYLTASMYVEYW-CEEKFGNLSLGDPDFSYHDKLP 1927

  Fly  1754 DGAK---KAYESIGCLDAIPGFV--NPMRSRLDFLGHGSNLSTIL-------------------- 1793
            |..:   .|...|...|::.|.:  |.:.:::....|..|.:..|                    
plant  1928 DHVEILVSAITRINEPDSLYGVIHSNKLSAQIITFEHEGNWTRALEYYDLQARSQKMVVPSSLSE 1992

  Fly  1794 -LESD---------HLDRASGQLCIDIMKG------------------NGLWSFAKLQQH--QNI 1828
             ||.:         |.....|::.....||                  .||.|.....|:  :.|
plant  1993 NLEVEQFQPTTSARHSVFGEGEVQRQPFKGLIRSLQQTGCMHVLDLYCRGLTSREGCFQYDPEFI 2057

  Fly  1829 EPDYEIFWRLGQWD-SLTDP-------KHQQNQTV---VRTSLDLEQEFKRHHFVA--------- 1873
            |..||..||.|:|| ||..|       :|.:|...   :...|...||.....|..         
plant  2058 ELQYEAAWRAGKWDFSLLYPQTHCQPLQHAKNNNYHESLHCCLRALQEGDYDGFYGKLKDTKKEL 2122

  Fly  1874 LRSIGQREEENSLSAIEQAYSCVRDILMEISVECLQSVYKYLTWLCSLQQAEDFCQIQFGTQLDP 1938
            :.||.:..||::    |..||.|  :.::| :..|..|:. |.|..|..|:.....::....:||
plant  2123 VLSISRASEEST----EFIYSTV--VKLQI-LHHLGLVWD-LRWTTSSHQSVHGYLVKQMACVDP 2179

  Fly  1939 ASTTKIFRKW----------QTELELKYGNFSCKEYVIAHQIALLKLAGTRASRRMSEFYQKDPI 1993
            ...|.....|          ||:|.:     :..|..||.:..||::.|.... .|....|.   
plant  2180 VIPTMDQLSWLNKDWNSIITQTQLHM-----TLLEPFIAFRRVLLQILGCEKC-TMQHLLQS--- 2235

  Fly  1994 STYLMKGIEECKSAGKLN----LAAKYTATLRELPNIRESIKISVLLEDAEINLKMGNQQIAKAI 2054
            ::.|.||.....:|..|:    |.|:.... :.:|:....      ||:|::....|..:::.::
plant  2236 ASLLRKGTRFSHAAASLHEFKFLCARSNGQ-QPVPDWLGK------LEEAKLLHAQGRHEVSISL 2293

  Fly  2055 LDYVTNNNEF------VYCVQRVPALRMQGEFLLDCNAETLSWVQSHKFNNSLKLIDDFVQHRQT 2113
            .:|:.:|.:.      :|        |:.|::|    |||.|       :||..:::.:::...:
plant  2294 ANYILHNYQLKEEASDIY--------RVIGKWL----AETRS-------SNSRTILEKYLRPAVS 2339

  Fly  2114 LSEKYRDIFDWHQLDAYASKQRTAAYATIAKYADREYQQLHDYRHSQEYQTLKDIIEQNRQTAEK 2178
            |:|:.........:|     :::..:..:|.|||..::...:...|.|:|....:.:...:..|.
plant  2340 LAEEQSSKICKRLVD-----RQSQTWFHLAHYADALFKSYEERLSSSEWQAALRLRKHKTKELEV 2399

  Fly  2179 VTQR-------ENQDRRVISVQMKRYASLDEQQLNQIEEKLTEYLRLALTNYMAYCRLDSGFSSA 2236
            :.:|       |..|..:....:::..::|:::..:::.....:|:|||..|.....:...:...
plant  2400 LIKRFKSSKKAEQSDYSLKIQDLQKQLTMDKEEAEKLQVDRDNFLKLALEGYKRCLEIGDKYDVR 2464

  Fly  2237 AIYRIISLWFTNATSKQCQECIKDEILTVPSYKFICAANQLTARLNSK-----NTSLLKGLTDLL 2296
            .::|.:|:||:.|:.|...:.:...|..|.|||||....|:.:||.|.     :.|....|..|:
plant  2465 VVFRQVSMWFSLASQKNVIDNMLSTIKEVQSYKFIPLVYQIASRLGSSKDESGSNSFQSALVSLI 2529

  Fly  2297 VQCGKDHPYHTFYQLYPLVFAHLDGENSNTERSGIA---RKIIA--MICEKNGTAGECSKQLESL 2356
            .:...||||||..||..|.......:|..:..|.:.   :|:.|  ::.:.:...|...:|::.|
plant  2530 RKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDMDKKLAAEHLLQDVSHYHGPMIRQMKQL 2594

  Fly  2357 LPALITFAN-EGKTND-NRPVSDSVRNKQFDKVRRWRNLNAVHCPTLELPVMPSKEYSIISVVKW 2419
            :...|..|. |.:..| ||.|:..      .::|..:.|..|...|..:||..|.:|:..|...:
plant  2595 VDIYIKLAELETRREDTNRKVALP------REIRSVKQLELVPVVTATIPVDRSCQYNEGSFPFF 2653

  Fly  2420 ---TNETTQCGGLNAPVKIMCVCSDGKIRAQLVK-GKDDLRQDAVMQQVFGIVNELLNQDSEFIE 2480
               ::..|...|:|||..:.|..|||:...||.| |.|||||||||:|.||:||..|:.:.:..:
plant  2654 RGLSDSVTVMNGINAPKVVECFGSDGQKYKQLAKSGNDDLRQDAVMEQFFGLVNTFLHNNRDTWK 2718

  Fly  2481 RKLKLRTYKVTPLSMRSGILEWCTNSVPVGHYLVVEGKG-GAHARYRPNDWNNNKCRKLSSDHLK 2544
            |:|.:|||||.|.:..:|:|||...::|:|.||:...:. |||.||...:|...|||    :|:.
plant  2719 RRLAVRTYKVIPFTPSAGVLEWVDGTIPLGDYLIGSSRSEGAHGRYGIGNWKYPKCR----EHMS 2779

  Fly  2545 SPKETRYAIYKKICENIKPVFHYFLLEKFPIPGVWFERRLAYTNSVATTSMVGYVLGLGDRHTQN 2609
            |.|:.|.| :..:|.|.:||.|||.||||..|..||.:|||||.|||.:|||||::||||||..|
plant  2780 SAKDKRKA-FVDVCTNFRPVMHYFFLEKFLQPADWFVKRLAYTRSVAASSMVGYIVGLGDRHAMN 2843

  Fly  2610 ILVDQQTAEVIHIDFGIAFEQGKIQTTPETVPFRLTRDFVAPMGICGTKGVFAKSCEATMHILRR 2674
            ||:||.||||:|||.|:|||||.:..|||.||||||||.:..|||.|.:|||.:.||.|:.::|.
plant  2844 ILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRT 2908

  Fly  2675 YKSVFTTILEVLLYDPLFIWGV--LKKKQSPQQSGE-ESVNLV-----------AQRALLLVQNK 2725
            .|....||:||.::|||:.|.:  ||..|..:::.: :.:||.           |.|||:.|:.|
plant  2909 NKEALLTIVEVFIHDPLYKWALSPLKALQRQKETEDYDGMNLEGLQEEFEGNKDATRALMRVKQK 2973

  Fly  2726 LDGREAGTMGDSNVEAQVERLINEATLPSNLCMLFPGW 2763
            |||.|.|.|  .::..|.::||.:|.....|..:||||
plant  2974 LDGYEGGEM--RSIHGQAQQLIQDAIDTDRLSHMFPGW 3009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tefuNP_001036712.1 FAT 1829..2170 CDD:280429 81/380 (21%)
PIKKc_ATM 2416..2696 CDD:270715 140/284 (49%)
FATC 2739..2767 CDD:280430 9/25 (36%)
ATMNP_001326746.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 268 1.000 Domainoid score I447
eggNOG 1 0.900 - - E1_KOG0892
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80538at2759
OrthoFinder 1 1.000 - - FOG0003948
OrthoInspector 1 1.000 - - oto3933
orthoMCL 1 0.900 - - OOG6_102827
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3248
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.720

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