DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS10 and RPS20

DIOPT Version :9

Sequence 1:NP_524355.2 Gene:mRpS10 / 41838 FlyBaseID:FBgn0038307 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_011848.1 Gene:RPS20 / 856371 SGDID:S000001007 Length:121 Species:Saccharomyces cerevisiae


Alignment Length:92 Identity:20/92 - (21%)
Similarity:37/92 - (40%) Gaps:29/92 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIYK-------KHRVQY 116
            :|..:...::|:       |.:|..::||....|.|       :|| :...|       |....|
Yeast    33 QLENVSSNIVKN-------AEQHNLVKKGPVRLPTK-------VLK-ISTRKTPNGEGSKTWETY 82

  Fly   117 EVRTHFRYMNFH-------KLTGSTLD 136
            |:|.|.||::..       ::|..|::
Yeast    83 EMRIHKRYIDLEAPVQIVKRITQITIE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS10NP_524355.2 Ribosomal_S10 57..154 CDD:278753 20/92 (22%)
RPS20NP_011848.1 Ribosomal_S10 23..118 CDD:412302 20/92 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0051
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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