DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art3 and prmt2

DIOPT Version :9

Sequence 1:NP_650434.1 Gene:Art3 / 41837 FlyBaseID:FBgn0038306 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_012826019.1 Gene:prmt2 / 780163 XenbaseID:XB-GENE-980934 Length:634 Species:Xenopus tropicalis


Alignment Length:562 Identity:147/562 - (26%)
Similarity:242/562 - (43%) Gaps:107/562 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KDTE-----VNDNTTEEEPVKEAPE------VPANSSSDEDEYDDIDDDDEPMDEGDELTTCLFC 55
            ||||     :...:.:.:.:..|.|      :|....::.:||.|:..|..|.:..|        
 Frog   123 KDTEGDSVFMGGYSGQGDTINMAGEGDNCGTLPRRVETEINEYKDVHRDIHPAESSD-------- 179

  Fly    56 TETSANISVAIDHLDARHKVNLSQLQRKFEMDQYSFIKLINYIRAKKISAEQLLSAEHPLWQDEK 120
                                      .|.|..::..|:..:.|..:|..:....|:|...:||. 
 Frog   180 --------------------------NKPEKAEFIKIEKQSAITEEKSMSTSGCSSEKSDFQDS- 217

  Fly   121 YLQPGEYEPWLCYDYEVLKTDGAPTQPSVLELQQRIAEQSQLLQQANEDMERMRNDYKALLQKVH 185
              ..||.|              ..||...|.:::.:..:..:...|.: :.....|...||..|.
 Frog   218 --TEGEEE--------------EDTQSENLCMREYVVIRDYMAADATQ-LSLCFGDKVLLLSAVT 265

  Fly   186 ADGEPKGSDQSVPRNNVC------------------------LDNEYFKSYAHFGIHHEMLSDKV 226
            .|.      ..|..|.:|                        .|.||:.||....:|.|||||..
 Frog   266 QDW------WWVKHNGICGYVPASYLHDALNDQEDTEVDDPWQDEEYYGSYKTLKLHLEMLSDVP 324

  Fly   227 RTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASK-AGAARVVGIDNSDIVYTAMDIIRKNKV 290
            ||:.|:..:|:|.:.:.||.:||:||||||:|.|.:| |....|..::.|:|......::::|.:
 Frog   325 RTTAYKEVILRNSSSLCGKHILDLGCGTGIISFFCAKLAQPEAVYAVEASEIAEQTRRLVKQNGI 389

  Fly   291 EN-VELIKGRLEDTDLPETKYDIIISEWMGYFLLYESMLDSIIYARENHLNPNGIILPSRCTLSL 354
            .| |.:|:.|.|:..|| ||.||::|||||..||:|.||:|::.||:..|..:|::.||...:.|
 Frog   390 SNLVHVIRQRAEELQLP-TKVDILVSEWMGTCLLFEFMLESVLQARDRWLKEDGVMWPSTACIHL 453

  Fly   355 LGYGDDTLYADEVEFWSNVYEVDMSDLRKQSIEEPLMQ-----VVDAEFMLTEPEQIANFDIMTV 414
            :.......||::|.||.|.|::|.|.|:..:.:|...:     |:..|..|:||..:.:.::.|:
 Frog   454 VPCSASKEYANKVLFWDNPYQLDFSLLKPLAAKEFFARPKPDYVLQPEDCLSEPCILLHLNLKTL 518

  Fly   415 DM-NYPNFTHQFSLKVTKPGRLSAFVGYFETLF---ELPSPVMFSTSPSATPTHWKQTVFFIENP 475
            .: ........|:..|...|.|..|..:|...|   |....:..:|.|.:..||||.|:|.::.|
 Frog   519 QLAELERMNSDFTFFVHTDGLLHGFTAWFSVQFQNLEEQGQLELNTGPFSPLTHWKHTLFMLDEP 583

  Fly   476 QVVKEGDVICGKITSRRHKEDVRGLSVDIE--VFGKKHKYNV 515
            ..|::||.|.|.:..:|:....|.:||.:.  :.||....||
 Frog   584 LQVQKGDKISGSVVFQRNSVWRRHMSVTLSWVINGKLTMQNV 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art3NP_650434.1 Methyltransf_18 243..346 CDD:289607 44/104 (42%)
prmt2XP_012826019.1 2A1904 <22..>232 CDD:273344 27/159 (17%)
SH3 235..287 CDD:388381 9/58 (16%)
Methyltransf_25 345..442 CDD:379312 41/97 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840669at2759
OrthoFinder 1 1.000 - - FOG0000206
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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