DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art3 and gstcd

DIOPT Version :9

Sequence 1:NP_650434.1 Gene:Art3 / 41837 FlyBaseID:FBgn0038306 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001019633.1 Gene:gstcd / 402871 ZFINID:ZDB-GENE-050320-41 Length:614 Species:Danio rerio


Alignment Length:494 Identity:100/494 - (20%)
Similarity:163/494 - (32%) Gaps:171/494 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DTEVNDNTTEEEPVKEAPEVPANSSSD------EDEYDDI---DDDDEP-----MDEGDELTTCL 53
            |::|.|...|..|..|.....|..|:|      ..|:.||   ...|.|     ..||      |
Zfish   204 DSQVKDAEKEPHPNVELSAALARLSTDAVCPPSSREHSDIRKVKSTDLPELEHVFAEG------L 262

  Fly    54 FCTETSANISVAIDH----LDARHKVNLSQLQ---RKFEMDQYSFIKLINYIRAKKISAEQL--L 109
            :.|.|...:...|..    |.......||.|.   |.::..|    :|...:||.|......  |
Zfish   263 YFTLTDVVLLPCIHQYLISLRTHSPSTLSHLPLLLRWYQRTQ----ELSGVLRAAKDCGMVFLTL 323

  Fly   110 SAEHP-LWQDEKYLQPGE-----YEPWLCYDYEVLKTDGAPTQPSVLELQQRIAEQSQLLQQANE 168
            ||..| |.|.:...|..|     .||::          |.| :|::.:||:             .
Zfish   324 SAADPCLTQQDAPPQASEEPKPKQEPFI----------GGP-RPTLTKLQE-------------N 364

  Fly   169 DMERMRNDYKALLQKVHADGEP--------KGSDQSVPRNNVCLDNEYFKSYAHFGIHHEMLSDK 225
            .::.:.:.|...|:.|..:..|        |.||....|....|||                   
Zfish   365 GIDAIYSAYPCPLRTVDWESLPAAVNPSEGKMSDSRALRKQQQLDN------------------- 410

  Fly   226 VRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKV 290
                  ..:::.|:| ..|.||:|          |.|..|.   |||..:.::.....|:.:||.
Zfish   411 ------LLAMVLNQA-QPGHTVVD----------FCSGGGH---VGIVLAYMLPKCQVILVENKE 455

  Fly   291 ENVELIKGRLEDTDLPETKYDIIISEWMGYF--------------LLYESMLDSIIYARENHLNP 341
            |:  ||:.|.....|..|....|.:. :.||              :..:.:||..:.||.     
Zfish   456 ES--LIRARERSAQLTLTNIGFIQTN-LDYFTGNFNIGVALHACGVATDMVLDRCLQARA----- 512

  Fly   342 NGIILPSRCTLSLLGYGDDTL---------YADEVEFWSNVYEVDMSDL-------RKQSIEEPL 390
             |.::...|    .|:..:||         :|:.:.:..::.....:|.       .::||.:..
Zfish   513 -GFVISPCC----YGFIQNTLKFNFPKSARFAETLSYKEHMILCRFADQTAVSLPPERRSIGKRC 572

  Fly   391 MQVVDAEFMLTEPEQIANFDIMTVDMNYPNFTHQFSLKV 429
            |.:||                  :|.::....|.:|::|
Zfish   573 MGLVD------------------LDRSWAAEAHGYSVRV 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art3NP_650434.1 Methyltransf_18 243..346 CDD:289607 27/116 (23%)
gstcdNP_001019633.1 AdoMet_MTases 403..521 CDD:327401 34/169 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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