DRSC/TRiP Functional Genomics Resources

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Protein Alignment Art3 and rmt3

DIOPT Version :10

Sequence 1:NP_650434.1 Gene:Art3 / 41837 FlyBaseID:FBgn0038306 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_595572.2 Gene:rmt3 / 2541248 PomBaseID:SPBC8D2.10C Length:510 Species:Schizosaccharomyces pombe


Alignment Length:528 Identity:176/528 - (33%)
Similarity:266/528 - (50%) Gaps:61/528 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SDEDEYDDIDDDDEPMDEGDELTTCLFCTETSANISVAIDHLDARHKVNLSQLQRKFEMDQYSFI 92
            |..|...|.|:::|..::......||||..|...:.....|....|..:..|::::..:|.|:.|
pombe     3 SHSDSEVDWDNEEEVWEDEVHEFCCLFCDSTFTCLKDLWSHCKEAHNFDFYQVKQQNNLDFYACI 67

  Fly    93 KLINYIRAKKISAEQLLSAEHP-LWQDEKYLQPGEYEPWLCYDYEVL-----KTDGAPTQPSVLE 151
            ||:||||:      |:...:.| |.:....|:..||...:..|..||     :.|......:.||
pombe    68 KLVNYIRS------QVKEGKTPDLDKLSDILRSDEYMISVLPDDSVLFSLGDELDSDFEDDNTLE 126

  Fly   152 LQ-------------QRIAEQSQLLQQANEDMERMRNDYKALLQKVHADG---EPKGSDQSVPRN 200
            ::             :::..|:|||   ...:|.:|.|....|.....|.   .||.:|.     
pombe   127 IEVENPADVSKDAEIKKLKLQNQLL---ISQLEEIRKDKMNELTSQTTDQLSVTPKKADN----- 183

  Fly   201 NVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAG 265
                |:.||:|||...||..||:|.|||..||..:..|:.:..|||||||||||||||:|.:|||
pombe   184 ----DSYYFESYAGNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAG 244

  Fly   266 AARVVGIDNSDIVYTAMDIIRKNKVEN-----VELIKGRLEDTDLPETKYDIIISEWMGYFLLYE 325
            |.:|..:|||||:..|:    .|..||     :..|:|::||..||..|.||||||||||.|.:|
pombe   245 AKKVYAVDNSDIIQMAI----SNAFENGLADQITFIRGKIEDISLPVGKVDIIISEWMGYALTFE 305

  Fly   326 SMLDSIIYARENHLNPNGIILPSRCTLSLLGYGDDTLYADEVEFWSNVYEVDMSDLRKQSIEEPL 390
            ||:||::.||:..|.|:||:.||...|.|....:..|..:.::|||:||...|:.::..|.:...
pombe   306 SMIDSVLVARDRFLAPSGIMAPSETRLVLTATTNTELLEEPIDFWSDVYGFKMNGMKDASYKGVS 370

  Fly   391 MQVVDAEFMLTEPEQIANFDIMTVDMNYPNFTHQFSLKVTKPGRLSAFVGYFETLF------ELP 449
            :|||...::..:|...|.|::.|..:...:||..|||.:...|.|.||..:|:|.|      .:|
pombe   371 VQVVPQTYVNAKPVVFARFNMHTCKVQDVSFTSPFSLIIDNEGPLCAFTLWFDTYFTTKRTQPIP 435

  Fly   450 SPV----MFSTSPSATPTHWKQTVFFIENPQVVKEGDVICGKITSRRHKEDVRGLSVDI--EVFG 508
            ..:    .|:|.|..|||||||.|..:.|...:::|..:.|.|:..::|::.|.|.:.:  .|.|
pombe   436 EAIDEACGFTTGPQGTPTHWKQCVLLLRNRPFLQKGTRVEGTISFSKNKKNNRDLDISVHWNVNG 500

  Fly   509 KKHKYNVV 516
            |....:.|
pombe   501 KADSQSYV 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art3NP_650434.1 COG4076 218..416 CDD:443253 88/202 (44%)
rmt3NP_595572.2 zf-C2H2_2 27..>80 CDD:463690 18/58 (31%)
COG4076 197..>359 CDD:443253 79/165 (48%)

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