DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-55 and HAT2

DIOPT Version :9

Sequence 1:NP_524354.1 Gene:Caf1-55 / 41836 FlyBaseID:FBgn0263979 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_010858.3 Gene:HAT2 / 856654 SGDID:S000000782 Length:401 Species:Saccharomyces cerevisiae


Alignment Length:405 Identity:148/405 - (36%)
Similarity:224/405 - (55%) Gaps:41/405 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS-DEQNHLL 84
            ::|||.:||.|.|.:||.|....|.|||||.||||...::....:....||:||||| :|:|:|.
Yeast    10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEEENYLK 74

  Fly    85 IASVQLP-----SEDAQFD-GSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACV 143
            .|.:.||     :||.|.: |..|.:      ...:....|.|..|..||.|:.|||||||:..:
Yeast    75 FAEINLPKEILSNEDPQEEAGEEYQS------SLPAPRSNIRITAKYEHEEEITRARYMPQDPNI 133

  Fly   144 IATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICL 208
            :||......|.::..::....           .|:.|:..||.||::..:.|.|||.|||||:.|
Yeast   134 VATINGQGTVFLYSRSEGLQS-----------TLKFHKDNGYALSFSTLVKGRLLSGSDDHTVAL 187

  Fly   209 WDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273
            |::.:.....:.:...|..  |:.::.|..||..::.|||:|::|..|.|.|.|.|||     |:
Yeast   188 WEVGSGGDPTKPVRTWNDL--HSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNT-----TI 245

  Fly   274 DAHTAEVNC------LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332
            |.    |.|      |:|:.:|..:||....|..|.|:||||:|..||....|:|.:..:::|.|
Yeast   246 DT----VKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTH 306

  Fly   333 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397
            .:.::.|||:|.||.:|||.:||.||:.:|||||.|||:.:|.||.:.::||..||..||::.|.
Yeast   307 VDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASA 371

  Fly   398 SEDNIMQVWQMAENV 412
            .|:||:|||:.:.::
Yeast   372 EEENILQVWKCSHSL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-55NP_524354.1 CAF1C_H4-bd 23..92 CDD:403473 33/74 (45%)
WD40 127..408 CDD:421866 107/286 (37%)
WD40 repeat 132..179 CDD:293791 11/46 (24%)
WD40 repeat 184..228 CDD:293791 16/43 (37%)
WD40 repeat 235..274 CDD:293791 16/38 (42%)
WD40 repeat 280..318 CDD:293791 17/43 (40%)
WD40 repeat 324..375 CDD:293791 23/50 (46%)
WD40 repeat 381..406 CDD:293791 11/24 (46%)
HAT2NP_010858.3 CAF1C_H4-bd 12..82 CDD:403473 32/69 (46%)
WD40 <116..401 CDD:225201 107/293 (37%)
WD40 repeat 122..158 CDD:293791 11/46 (24%)
WD40 repeat 163..204 CDD:293791 15/40 (38%)
WD40 repeat 212..247 CDD:293791 16/39 (41%)
WD40 repeat 254..292 CDD:293791 15/37 (41%)
WD40 repeat 298..349 CDD:293791 23/50 (46%)
WD40 repeat 355..380 CDD:293791 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344760
Domainoid 1 1.000 72 1.000 Domainoid score I2236
eggNOG 1 0.900 - - E1_KOG0264
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I584
Isobase 1 0.950 - 0.928771 Normalized mean entropy S514
OMA 1 1.010 - - QHG53987
OrthoFinder 1 1.000 - - FOG0001098
OrthoInspector 1 1.000 - - oto99780
orthoMCL 1 0.900 - - OOG6_101102
Panther 1 1.100 - - LDO PTHR22850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R552
SonicParanoid 1 1.000 - - X748
TreeFam 1 0.960 - -
1514.740

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